BUSCO Gene Details in Acropora florida

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora floridaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.3% [S: 68.3%, D: 12.0%] F: 11.1%, M: 8.7%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,571 (80.3%)2,187 (68.3%)384 (12.0%)355 (11.1%)277 (8.7%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora florida: 3,400 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
14308at6073Complete381.2195.0aflo_s0399.g18.t1thymocyte nuclear protein 1JBrowse
14320at6073Complete708.7456.0aflo_s0205.g18.t1Usher syndrome type-1GJBrowse
14352at6073Complete886.6558.0aflo_s0095.g11.t1uncharacterized protein LOC116307487JBrowse
14388at6073Complete712.1528.0aflo_s0230.g47.t1protein zwilch homologJBrowse
14433at6073Complete743.9421.0aflo_s0571.g3.t1vacuolar protein sorting-associated protein 4B-likeJBrowse
14442at6073Complete564.0367.0aflo_s0057.g56.t1evolutionarily conserved signaling intermediate in Toll pathway, mitochondrialJBrowse
14459at6073Fragmented408.8204.0aflo_s1675.g1.t1exosome complex component RRP43JBrowse
14502at6073Complete581.8404.0aflo_s0230.g40.t1growth/differentiation factor 6-A-likeJBrowse
14507at6073Complete527.1345.0aflo_s0018.g51.t1SynaptotagminJBrowse
14509at6073Duplicated1862.61261.0aflo_s0011.g118.t1Fanconi anemia group JJBrowse
14509at6073Duplicated1848.91261.0aflo_s0011.g118.t2Fanconi anemia group JJBrowse
14517at6073Complete232.5110.0aflo_s0051.g12.t1N-alpha-acetyltransferase 20JBrowse
14525at6073Complete1133.7531.0aflo_s0002.g152.t1Aspartate--tRNA ligase, cytoplasmicJBrowse
14562at6073Complete409.3204.0aflo_s0208.g11.t1ubiquitin-conjugating enzyme E2 SJBrowse
14574at6073Complete741.1404.0aflo_s0203.g80.t1glucose-fructose oxidoreductase domain-containing protein 1JBrowse
14606at6073Fragmented554.1270.0aflo_s0196.g8.t1uncharacterized protein LOC116289408JBrowse
14608at6073Complete672.4302.0aflo_s0047.g55.t1ras-related GTP-binding protein AJBrowse
14620at6073Complete727.6381.0aflo_s0148.g19.t1Terminal nucleotidyltransferase 5CJBrowse
14673at6073Complete1986.51047.0aflo_s0287.g5.t1nuclear pore complex protein Nup133-likeJBrowse
14741at6073Complete462.4234.0aflo_s0225.g2.t1Eukaryotic translation initiation factor 4E type 2JBrowse
Go to page: of 170 pages
TOP