BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
14320at6073Complete711.1456.0aint_s0121.g17.t1Usher syndrome type-1GJBrowse
14352at6073Complete883.6557.0aint_s0131.g34.t1uncharacterized protein LOC116307487JBrowse
14388at6073Complete711.5528.0aint_s0199.g36.t1protein zwilch homologJBrowse
14433at6073Complete745.8421.0aint_s0178.g45.t1vacuolar protein sorting-associated protein 4B-likeJBrowse
14442at6073Complete561.9367.0aint_s0101.g44.t1evolutionarily conserved signaling intermediate in Toll pathway, mitochondrialJBrowse
14459at6073Complete506.9270.0aint_s0007.g66.t1exosome complex component RRP43JBrowse
14502at6073Complete583.6404.0aint_s0199.g29.t1growth/differentiation factor 6-A-likeJBrowse
14507at6073Fragmented469.7267.0aint_s0095.g19.t1SynaptotagminJBrowse
14509at6073Duplicated1928.21261.0aint_s0054.g69.t2Fanconi anemia group JJBrowse
14509at6073Duplicated1862.01261.0aint_s0054.g69.t1Fanconi anemia group JJBrowse
14517at6073Complete206.999.0aint_s0040.g53.t1N-alpha-acetyltransferase 20JBrowse
14525at6073Duplicated1177.1529.0aint_s0261.g24.t2Aspartate--tRNA ligase, cytoplasmicJBrowse
14525at6073Duplicated1134.6529.0aint_s0261.g24.t1Aspartate--tRNA ligase, cytoplasmicJBrowse
14562at6073Complete409.3204.0aint_s0186.g10.t1ubiquitin-conjugating enzyme E2 SJBrowse
14574at6073Complete743.7404.0aint_s0362.g4.t1glucose-fructose oxidoreductase domain-containing protein 1JBrowse
14606at6073Fragmented624.3300.0aint_s0013.g32.t1uncharacterized protein LOC116289408JBrowse
14608at6073Complete672.4302.0aint_s0077.g35.t1ras-related GTP-binding protein AJBrowse
14620at6073Complete726.9381.0aint_s0009.g17.t1Terminal nucleotidyltransferase 5CJBrowse
14673at6073Complete1648.61081.0aint_s0027.g53.t1nuclear pore complex protein Nup133-likeJBrowse
14741at6073Complete462.4234.0aint_s0166.g2.t1Eukaryotic translation initiation factor 4E type 2JBrowse
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