BUSCO Gene Details in Acropora loripes

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora loripesBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.5% [S: 82.8%, D: 6.7%] F: 6.9%, M: 3.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,868 (89.5%)2,652 (82.8%)216 (6.7%)221 (6.9%)114 (3.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora loripes: 3,324 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
14194at6073Duplicated488.6415.0alor_g12857.t1uncharacterized protein LOC116294854JBrowse
14194at6073Duplicated487.3415.0alor_g12.t1uncharacterized protein LOC116294854JBrowse
14205at6073Duplicated334.0188.0alor_g18566.t139S ribosomal protein L22, mitochondrial-likeJBrowse
14205at6073Duplicated334.0188.0alor_g18893.t139S ribosomal protein L22, mitochondrial-likeJBrowse
14214at6073Complete850.5435.0alor_g8039.t1SynaptotagminJBrowse
14280at6073Complete365.5182.0alor_g13339.t1malignant T-cell-amplified sequence 1JBrowse
14288at6073Complete775.8494.0alor_g12010.t1nucleolar complex protein 4 homologJBrowse
14308at6073Complete378.4195.0alor_g11579.t1thymocyte nuclear protein 1JBrowse
14320at6073Complete714.5456.0alor_g2686.t1Usher syndrome type-1GJBrowse
14352at6073Complete775.5485.0alor_g85.t1uncharacterized protein LOC116307487JBrowse
14388at6073Complete715.1528.0alor_g22685.t1protein zwilch homologJBrowse
14433at6073Complete696.5395.0alor_g3348.t1vacuolar protein sorting-associated protein 4B-likeJBrowse
14442at6073Complete562.6367.0alor_g10044.t1evolutionarily conserved signaling intermediate in Toll pathway, mitochondrialJBrowse
14459at6073Complete495.5267.0alor_g3945.t1exosome complex component RRP43JBrowse
14502at6073Complete585.1404.0alor_g22678.t1growth/differentiation factor 6-A-likeJBrowse
14507at6073Complete516.3343.0alor_g18500.t1SynaptotagminJBrowse
14509at6073Complete1231.01024.0alor_g24397.t1Fanconi anemia group JJBrowse
14517at6073Complete232.4110.0alor_g23233.t1N-alpha-acetyltransferase 20JBrowse
14525at6073Complete1115.1520.0alor_g23675.t1Aspartate--tRNA ligase, cytoplasmicJBrowse
14562at6073Complete409.6204.0alor_g20155.t1ubiquitin-conjugating enzyme E2 SJBrowse
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