BUSCO Gene Details in Acropora microphthalma

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora microphthalmaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.8% [S: 69.1%, D: 11.7%] F: 10.9%, M: 8.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,588 (80.8%)2,212 (69.1%)376 (11.7%)348 (10.9%)267 (8.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora microphthalma: 3,406 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
14136at6073Complete635.5449.0amic_s0023.g92.t1golgin-45-likeJBrowse
14176at6073Fragmented114.286.0amic_s0019.g130.t1Replication protein A 32 kDa subunitJBrowse
14194at6073Complete490.9419.0amic_s0033.g22.t1uncharacterized protein LOC116294854JBrowse
14205at6073Fragmented197.4110.0amic_s0091.g12.t139S ribosomal protein L22, mitochondrial-likeJBrowse
14214at6073Duplicated928.0432.0amic_s0052.g20.t2SynaptotagminJBrowse
14214at6073Duplicated848.3432.0amic_s0052.g20.t1SynaptotagminJBrowse
14256at6073Duplicated565.4344.0amic_s0045.g6.t2TAR DNA-binding protein 43JBrowse
14256at6073Duplicated559.5344.0amic_s0045.g6.t1TAR DNA-binding protein 43JBrowse
14280at6073Complete365.5182.0amic_s0154.g29.t1malignant T-cell-amplified sequence 1JBrowse
14288at6073Complete777.0494.0amic_s0010.g96.t1nucleolar complex protein 4 homologJBrowse
14308at6073Complete381.1195.0amic_s0054.g79.t1thymocyte nuclear protein 1JBrowse
14320at6073Complete714.2456.0amic_s0125.g18.t1Usher syndrome type-1GJBrowse
14352at6073Complete890.2558.0amic_s0096.g14.t1uncharacterized protein LOC116307487JBrowse
14388at6073Complete712.7528.0amic_s0127.g12.t1protein zwilch homologJBrowse
14433at6073Duplicated745.5421.0amic_s0119.g19.t1vacuolar protein sorting-associated protein 4B-likeJBrowse
14433at6073Duplicated675.6394.0amic_s0119.g19.t2vacuolar protein sorting-associated protein 4B-likeJBrowse
14442at6073Complete564.1367.0amic_s0005.g117.t1evolutionarily conserved signaling intermediate in Toll pathway, mitochondrialJBrowse
14446at6073Complete354.7167.0amic_s0133.g5.t1sorcinJBrowse
14459at6073Complete505.3270.0amic_s0235.g20.t1exosome complex component RRP43JBrowse
14502at6073Complete582.7404.0amic_s0127.g5.t1growth/differentiation factor 6-A-likeJBrowse
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