BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
8805at6073Complete704.8402.0XP_074612553.1potassium voltage-gated channel Shal-likeJBrowse
8845at6073Complete883.8536.0XP_074626342.1early growth response protein 1JBrowse
8864at6073Complete401.9261.0XP_074623781.1Cyclin-dependent kinase 5 activator 1JBrowse
8869at6073Complete481.4254.0XP_074629017.1Haloacid dehalogenase-like hydrolase domain-containing protein 2JBrowse
8874at6073Complete569.4303.0XP_074618218.1regulation of nuclear pre-mRNA domain-containing protein 1BJBrowse
8899at6073Duplicated749.8398.0XP_074615532.1transcriptional enhancer factor TEF-1-likeJBrowse
8899at6073Duplicated746.1398.0XP_074615533.1transcriptional enhancer factor TEF-1-likeJBrowse
8905at6073Duplicated575.5419.0XP_074617120.1protein naked cuticle homolog 2-likeJBrowse
8905at6073Duplicated571.6416.0XP_074617119.1protein naked cuticle homolog 2-likeJBrowse
8946at6073Complete240.7125.0XP_074624616.1NADH dehydrogenase JBrowse
8984at6073Complete879.2433.0XP_074630520.16-phosphofructo-2-kinase/fructose-2, 6-bisphosphataseJBrowse
9011at6073Complete1631.7937.0XP_074621834.1Coronin-7JBrowse
9020at6073Complete1049.7552.0XP_074615430.1tRNA (guanine(26)-N(2))-dimethyltransferase-likeJBrowse
9037at6073Complete830.3450.0XP_074615851.1phosphatidate cytidylyltransferaseJBrowse
9061at6073Complete464.5272.0XP_074621635.1L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase-likeJBrowse
9075at6073Complete656.8359.0XP_074615491.1Ankyrin repeat and MYND domain-containing protein 2JBrowse
9095at6073Complete443.1221.0XP_074626403.1Ubiquitin-conjugating enzyme E2 J2JBrowse
9109at6073Complete327.2186.0XP_074631755.1COMM domain-containing protein 1JBrowse
9117at6073Duplicated650.9362.0XP_074629417.1Protein Wnt-1JBrowse
9117at6073Duplicated624.3338.0XP_074629418.1Protein Wnt-1JBrowse
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