BUSCO Gene Details in Hydra oligactis

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Hydra oligactisBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.2% [S: 66.0%, D: 7.2%] F: 13.3%, M: 13.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,344 (73.2%)2,115 (66.0%)229 (7.2%)427 (13.3%)432 (13.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Hydra oligactis: 3,025 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
15702at6073Complete842.7465.0HOLI00564.G7346Acid-sensing ion channel 2JBrowse
15713at6073Complete277.5193.0HOLI04021.G7007mitotic spindle assembly checkpoint protein MAD2B-likeJBrowse
15842at6073Complete966.8554.0HOLI01260.G22813cAMP-specific 3',5'-cyclic phosphodiesterase 4C-likeJBrowse
15844at6073Complete740.8431.0HOLI00086.G60409uncharacterized protein LOC110233383 isoform X1JBrowse
15944at6073Complete635.7343.0HOLI00511.G31707cyclin-dependent kinase 20JBrowse
15954at6073Complete197.7169.0HOLI00156.G47473BLOC-1-related complex subunit 5JBrowse
15990at6073Duplicated481.2355.0HOLI02061.G16295RNA 3 -terminal phosphate cyclaseJBrowse
15990at6073Duplicated530.2354.0HOLI00355.G48658RNA 3 -terminal phosphate cyclaseJBrowse
16004at6073Complete1357.0909.0HOLI00112.G35324nuclear pore complex protein Nup107-likeJBrowse
16052at6073Complete517.8504.0HOLI00578.G36553uncharacterized protein LOC116304310 isoform X1JBrowse
16097at6073Complete500.2337.0HOLI02049.G27468aldose 1-epimeraseJBrowse
16115at6073Complete728.9576.0HOLI00014.G10344ATP-binding cassette sub-family B member 7, mitochondrialJBrowse
16189at6073Complete1192.5763.0HOLI03660.G9117E3 ubiquitin-protein ligase trim71JBrowse
16197at6073Complete520.5716.0HOLI02287.G8112anillinJBrowse
16222at6073Complete197.6141.0HOLI00097.G58472protein FAM136AJBrowse
16272at6073Duplicated543.9465.0HOLI00055.G4416lysophospholipid acyltransferase 5-likeJBrowse
16272at6073Duplicated543.9465.0HOLI02372.G44232lysophospholipid acyltransferase 5-likeJBrowse
16272at6073Duplicated510.8464.0HOLI00055.G4415lysophospholipid acyltransferase 5-likeJBrowse
16272at6073Duplicated509.7463.0HOLI02372.G44231lysophospholipid acyltransferase 5-likeJBrowse
16274at6073Complete363.8223.0HOLI00829.G4485uracil phosphoribosyltransferase homologJBrowse
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