BUSCO Gene Details in Turritopsis rubra

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Turritopsis rubraBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 77.6% [S: 74.9%, D: 2.7%] F: 11.7%, M: 10.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,487 (77.6%)2,400 (74.9%)87 (2.7%)376 (11.7%)340 (10.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.

BUSCO hits recorded for Turritopsis rubra: 2,952 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
16222at6073Complete194.1139BRAKERIOWP00000008486.1protein FAM136AJBrowse
16272at6073Duplicated506.4442BRAKERIOWP00000004966.1lysophospholipid acyltransferase 5-likeJBrowse
16272at6073Duplicated563.1430BRAKERIOWP00000004961.1lysophospholipid acyltransferase 5-likeJBrowse
16274at6073Complete134.7194BRAKERIOWP00000010080.1uracil phosphoribosyltransferase homologJBrowse
16289at6073Complete302.5363BRAKERIOWP00000001181.1hyccin-likeJBrowse
16329at6073Fragmented335.2345BRAKERIOWP00000005380.1protein FAM227A-likeJBrowse
16397at6073Complete183.1113BRAKERIOWP00000002721.1cytochrome b-c1 complex subunit 7JBrowse
16411at6073Complete610.5671BRAKERIOWP00000017174.1zinc finger protein 208JBrowse
16457at6073Complete452.8278BRAKERIOWP00000007505.1exosome complex exonuclease RRP42-likeJBrowse
16462at6073Complete613.3385BRAKERIOWP00000007616.1cyclin-dependent kinase 14-likeJBrowse
16511at6073Fragmented316.5258BRAKERIOWP00000017241.1insulin gene enhancer protein ISL-1-likeJBrowse
16531at6073Complete132.9249BRAKERIOWP00000009639.1fasciculation and elongation protein zeta-2-likeJBrowse
16533at6073Complete476.0254BRAKERIOWP00000015211.1Ribosome production factor 1JBrowse
16538at6073Complete212.1137BRAKERIOWP00000017221.1glia maturation factor beta-likeJBrowse
16561at6073Fragmented602.2324BRAKERIOWP00000013688.1intraflagellar transport protein 88 homologJBrowse
16601at6073Complete611.1561BRAKERIOWP00000012229.1BRCA1-associated RING domain protein 1JBrowse
16629at6073Complete748.1594BRAKERIOWP00000019495.1ankyrin repeat domain-containing protein 13D-likeJBrowse
16631at6073Fragmented415.3225BRAKERIOWP00000004091.1Cyclin-dependent kinase 8JBrowse
16676at6073Complete395.1438BRAKERIOWP00000005902.1Methyltransferase-like protein 25JBrowse
16717at6073Complete382.0376BRAKERIOWP00000017175.1major facilitator superfamily domain-containing protein 7-likeJBrowse
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