BUSCO Gene Details in Hydractinia echinata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Hydractinia echinataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 92.2% [S: 34.9%, D: 57.2%] F: 4.8%, M: 3.1%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,952 (92.2%)1,119 (34.9%)1,833 (57.2%)152 (4.8%)99 (3.1%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Hydractinia echinata: 6,262 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
77177at6073Complete406.1322.0ENSDJXP00000040954.1HAUS augmin-like complex subunit 4JBrowse
77182at6073Duplicated322.4267.0ENSDJXP00000042786.1transcription initiation factor IIA subunit 1JBrowse
77182at6073Duplicated313.1260.0ENSDJXP00000042781.1transcription initiation factor IIA subunit 1JBrowse
77184at6073Duplicated796.2593.0ENSDJXP00000021006.1transcriptional protein SWT1-likeJBrowse
77184at6073Duplicated800.1543.0ENSDJXP00000051491.1transcriptional protein SWT1-likeJBrowse
77184at6073Duplicated749.0519.0ENSDJXP00000051481.1transcriptional protein SWT1-likeJBrowse
77184at6073Duplicated748.7519.0ENSDJXP00000051465.1transcriptional protein SWT1-likeJBrowse
77192at6073Duplicated320.8267.0ENSDJXP00000046078.1HAUS augmin-like complex subunit 1JBrowse
77192at6073Duplicated284.9244.0ENSDJXP00000046090.1HAUS augmin-like complex subunit 1JBrowse
77195at6073Complete337.3315.0ENSDJXP00000043044.1WD40/YVTN repeat-like-containing domain superfamilyJBrowse
77199at6073Duplicated340.4234.0ENSDJXP00000023674.1reticulon-1-AJBrowse
77199at6073Duplicated340.4234.0ENSDJXP00000023682.1reticulon-1-AJBrowse
77200at6073Fragmented260.3390.0ENSDJXP00000023247.1scaffold protein salvador-likeJBrowse
77217at6073Duplicated349.5251.0ENSDJXP00000044181.1ribosomal L1 domain-containing protein 1JBrowse
77217at6073Duplicated343.0248.0ENSDJXP00000044175.1ribosomal L1 domain-containing protein 1JBrowse
77220at6073Duplicated321.6274.0ENSDJXP00000001869.1uncharacterized protein LOC114517244JBrowse
77220at6073Duplicated321.6274.0ENSDJXP00000001879.1uncharacterized protein LOC114517244JBrowse
77225at6073Duplicated2526.31986.0ENSDJXP00000010423.1abnormal spindle-like microcephaly-associated proteinJBrowse
77225at6073Duplicated2734.51932.0ENSDJXP00000010437.1abnormal spindle-like microcephaly-associated proteinJBrowse
77227at6073Complete444.8439.0ENSDJXP00000021282.1ETS translocation variant 1JBrowse
Go to page: of 314 pages
TOP