BUSCO Gene Details in Acropora gemmifera

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora gemmiferaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 78.8% [S: 65.8%, D: 13.0%] F: 12.3%, M: 8.9%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,524 (78.8%)2,109 (65.8%)415 (13.0%)395 (12.3%)284 (8.9%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora gemmifera: 3,444 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
14214at6073Duplicated848.3432.0agem_s0093.g30.t1SynaptotagminJBrowse
14256at6073Complete557.8343.0agem_s0118.g2.t1TAR DNA-binding protein 43JBrowse
14280at6073Complete364.2182.0agem_s0040.g129.t1malignant T-cell-amplified sequence 1JBrowse
14288at6073Complete775.6492.0agem_s0091.g35.t1nucleolar complex protein 4 homologJBrowse
14308at6073Complete377.1195.0agem_s0124.g69.t1thymocyte nuclear protein 1JBrowse
14320at6073Complete712.1456.0agem_s0023.g157.t1Usher syndrome type-1GJBrowse
14352at6073Complete886.5558.0agem_s0069.g13.t1uncharacterized protein LOC116307487JBrowse
14388at6073Complete712.3528.0agem_s0081.g66.t1protein zwilch homologJBrowse
14433at6073Duplicated802.6421.0agem_s0211.g43.t3vacuolar protein sorting-associated protein 4B-likeJBrowse
14433at6073Duplicated746.0421.0agem_s0211.g43.t1vacuolar protein sorting-associated protein 4B-likeJBrowse
14442at6073Complete564.7367.0agem_s0070.g78.t1evolutionarily conserved signaling intermediate in Toll pathway, mitochondrialJBrowse
14459at6073Complete507.8270.0agem_s0004.g161.t1exosome complex component RRP43JBrowse
14502at6073Complete582.1404.0agem_s0081.g72.t1growth/differentiation factor 6-A-likeJBrowse
14507at6073Complete524.3345.0agem_s0010.g131.t1SynaptotagminJBrowse
14509at6073Complete1862.81261.0agem_s0002.g65.t1Fanconi anemia group JJBrowse
14517at6073Complete232.4110.0agem_s0275.g12.t1N-alpha-acetyltransferase 20JBrowse
14525at6073Complete1134.1525.0agem_s0027.g58.t1Aspartate--tRNA ligase, cytoplasmicJBrowse
14562at6073Complete409.3204.0agem_s0175.g13.t1ubiquitin-conjugating enzyme E2 SJBrowse
14574at6073Complete743.7404.0agem_s0026.g20.t1glucose-fructose oxidoreductase domain-containing protein 1JBrowse
14606at6073Fragmented628.1300.0agem_s0128.g31.t1uncharacterized protein LOC116289408JBrowse
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