BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
9123at6073Duplicated1140.5841.0XP_074625038.1serine/threonine-protein kinase LATS1-likeJBrowse
9123at6073Duplicated1140.5841.0XP_074625039.1serine/threonine-protein kinase LATS1-likeJBrowse
9123at6073Duplicated1140.5841.0XP_074625040.1serine/threonine-protein kinase LATS1-likeJBrowse
9128at6073Complete645.8391.0XP_074609802.1monoacylglycerol lipase ABHD2-likeJBrowse
9155at6073Complete605.0339.0XP_074632058.1GDP-fucose protein O-fucosyltransferase 1JBrowse
9217at6073Duplicated245.7129.0XP_074627240.12Fe-2S ferredoxin-likeJBrowse
9217at6073Duplicated245.7129.0XP_074627241.12Fe-2S ferredoxin-likeJBrowse
9224at6073Complete660.3333.0XP_074610096.1GDP-fucose transporter 1JBrowse
9275at6073Complete773.9471.0XP_074638591.1peptidyl-prolyl cis-trans isomerase FKBP4-likeJBrowse
9281at6073Complete932.6583.0XP_074606052.1U3 small nucleolar RNA-associated protein 6JBrowse
9308at6073Complete1632.7769.0XP_074622366.1dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3BJBrowse
9329at6073Complete404.3266.0XP_074637750.1N-acetylglucosamine-1-phosphotransferase subunit gammaJBrowse
9376at6073Complete854.7445.0XP_074632813.1transcriptional regulator ERG-likeJBrowse
9382at6073Complete712.2517.0XP_074613576.1uncharacterized protein C18H10.09-likeJBrowse
9394at6073Complete532.0271.0XP_074606126.1E3 ubiquitin-protein ligase CHIP-likeJBrowse
9452at6073Complete580.0312.0XP_074622921.1Cyclin-dependent kinase 6JBrowse
9467at6073Complete771.3479.0XP_074623555.1stabilizer of axonemal microtubules 1JBrowse
9477at6073Duplicated457.1291.0XP_074608257.1aristaless-related homeobox protein-likeJBrowse
9477at6073Duplicated457.1291.0XP_074608266.1aristaless-related homeobox protein-likeJBrowse
9539at6073Duplicated455.9244.0XP_074613627.1copper homeostasis protein cutC homologJBrowse
Go to page: of 238 pages
TOP