Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.
Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.5% [S: 71.4%, D: 2.1%] F: 9.2%, M: 17.3%
| Complete (C = S + D) | Single-copy (S) | Duplicated (D) | Fragmented (F) | Missing (M) |
|---|---|---|---|---|
| 2,355 (73.5%) | 2,287 (71.4%) | 68 (2.1%) | 294 (9.2%) | 554 (17.3%) |
A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.
Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.
| Busco ID | Status | Score | Length | Gene ID | Description | Visualization |
|---|---|---|---|---|---|---|
| 17629at6073 | Complete | 481.7 | 788 | BRAKERHOCP00005017471.1 | glycerol-3-phosphate acyltransferase 1, mitochondrial-like | JBrowse |
| 17637at6073 | Complete | 597.2 | 545 | BRAKERHOCP00005015571.1 | T-cell immunomodulatory protein-like | JBrowse |
| 17759at6073 | Duplicated | 271.4 | 285 | BRAKERHOCP00005017433.1 | Elongation factor Ts, mitochondrial | JBrowse |
| 17759at6073 | Duplicated | 269.5 | 277 | BRAKERHOCP00005017516.1 | Elongation factor Ts, mitochondrial | JBrowse |
| 17781at6073 | Complete | 507.3 | 378 | BRAKERHOCP00005004033.1 | zinc finger protein 277 | JBrowse |
| 17839at6073 | Complete | 229.2 | 155 | BRAKERHOCP00005012230.1 | density-regulated protein homolog | JBrowse |
| 17863at6073 | Complete | 266.9 | 203 | BRAKERHOCP00005020094.1 | DNA replication complex GINS protein SLD5 | JBrowse |
| 17866at6073 | Complete | 1711.2 | 799 | BRAKERHOCP00005005374.1 | transitional endoplasmic reticulum ATPase | JBrowse |
| 17892at6073 | Complete | 833.7 | 454 | BRAKERHOCP00005012043.1 | serine/threonine-protein kinase N2-like | JBrowse |
| 17922at6073 | Complete | 941.5 | 601 | BRAKERHOCP00005009393.1 | E3 ubiquitin-protein ligase traf7 | JBrowse |
| 17927at6073 | Complete | 604.9 | 373 | BRAKERHOCP00005019438.1 | cAMP-dependent protein kinase type II regulatory subunit-like | JBrowse |
| 17971at6073 | Complete | 207.5 | 161 | BRAKERHOCP00005012995.1 | Mitochondrial fission process protein 1 | JBrowse |
| 17995at6073 | Complete | 1245.1 | 860 | BRAKERHOCP00005010456.1 | protein disulfide-isomerase A5-like | JBrowse |
| 18049at6073 | Complete | 301.1 | 231 | BRAKERHOCP00005016361.1 | uncharacterized protein KIAA0513-like | JBrowse |
| 18146at6073 | Complete | 667.4 | 526 | BRAKERHOCP00005004680.1 | pumilio homolog 3 | JBrowse |
| 18253at6073 | Complete | 269.9 | 272 | BRAKERHOCP00005000781.1 | ribonuclease H1 | JBrowse |
| 18264at6073 | Complete | 613.7 | 624 | BRAKERHOCP00005001413.1 | OTU domain-containing protein 7B | JBrowse |
| 18355at6073 | Complete | 885.7 | 489 | BRAKERHOCP00005007977.1 | histidine--tRNA ligase, cytoplasmic-like | JBrowse |
| 18391at6073 | Fragmented | 297.6 | 237 | BRAKERHOCP00005014637.1 | E3 ubiquitin-protein ligase AMFR-like | JBrowse |
| 18432at6073 | Complete | 190.2 | 186 | BRAKERHOCP00005015167.1 | testis, prostate and placenta-expressed protein-like | JBrowse |