BUSCO Gene Details in Turritopsis rubra

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Turritopsis rubraBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 77.6% [S: 74.9%, D: 2.7%] F: 11.7%, M: 10.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,487 (77.6%)2,400 (74.9%)87 (2.7%)376 (11.7%)340 (10.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.

BUSCO hits recorded for Turritopsis rubra: 2,952 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
16788at6073Fragmented247.3316BRAKERIOWP00000008913.1protein SCAI-likeJBrowse
16906at6073Complete782.7752BRAKERIOWP00000004902.1Serine/threonine-protein phosphatase 6 regulatory subunit 3-AJBrowse
16997at6073Complete120.094BRAKERIOWP00000007649.1HIG1 domain family member 2A, mitochondrialJBrowse
17010at6073Complete966.9450BRAKERIOWP00000011358.1dual specificity tyrosine-phosphorylation-regulated kinase 2JBrowse
17013at6073Complete280.1374BRAKERIOWP00000010249.1mediator of RNA polymerase II transcription subunit 26JBrowse
17053at6073Complete1093.6677BRAKERIOWP00000020198.1fermitin family homolog 2JBrowse
17075at6073Complete1005.5727BRAKERIOWP00000008135.1conserved oligomeric Golgi complex subunit 7JBrowse
17079at6073Complete495.5282BRAKERIOWP00000000102.1POU domain, class 4, transcription factor 3JBrowse
17115at6073Complete504.2411BRAKERIOWP00000001362.1Transcriptional adapter 3JBrowse
17124at6073Complete669.1483BRAKERIOWP00000006087.1integrator complex subunit 14JBrowse
17128at6073Complete410.5249BRAKERIOWP00000007528.1malectinJBrowse
17141at6073Complete331.6308BRAKERIOWP00000000908.1vegetative incompatibility protein HET-E-1-likeJBrowse
17159at6073Complete409.4270BRAKERIOWP00000003330.1CBY1-interacting BAR domain-containing protein 1JBrowse
17166at6073Complete383.6214BRAKERIOWP00000002378.1ras-related protein Rab-23JBrowse
17189at6073Complete811.1539BRAKERIOWP00000011447.1mitochondrial import receptor subunit TOM70JBrowse
17225at6073Complete1001.1766BRAKERIOWP00000016277.1Rho GTPase-activating protein 7JBrowse
17230at6073Fragmented870.6649BRAKERIOWP00000007448.1dynein axonemal assembly factor 5JBrowse
17256at6073Complete555.1672BRAKERIOWP00000003149.1F-box/WD repeat-containing protein 7-likeJBrowse
17260at6073Complete375.7265BRAKERIOWP00000006162.11-acyl-sn-glycerol-3-phosphate acyltransferase alphaJBrowse
17332at6073Fragmented699.2427BRAKERIOWP00000020387.1metal transporter CNNM2JBrowse
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