BUSCO Gene Details in Acropora florida

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora floridaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.3% [S: 68.3%, D: 12.0%] F: 11.1%, M: 8.7%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,571 (80.3%)2,187 (68.3%)384 (12.0%)355 (11.1%)277 (8.7%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora florida: 3,400 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
15248at6073Complete458.2221.0aflo_s0357.g5.t1vesicle-associated membrane protein 7JBrowse
15312at6073Complete240.3135.0aflo_s0064.g10.t1Mitochondrial intermembrane space import and assembly protein 40JBrowse
15346at6073Complete417.0238.0aflo_s0020.g73.t1protein C1orf43 homologJBrowse
15348at6073Duplicated279.3166.0aflo_s0109.g33.t2YY1-associated factor 2JBrowse
15348at6073Duplicated261.1147.0aflo_s0109.g33.t1YY1-associated factor 2JBrowse
15359at6073Complete409.6219.0aflo_s0269.g14.t1EKC/KEOPS complex subunit TP53RKJBrowse
15362at6073Duplicated1485.8852.0aflo_s0230.g53.t1diacylglycerol kinase theta-likeJBrowse
15362at6073Duplicated1485.4852.0aflo_s0230.g53.t2diacylglycerol kinase theta-likeJBrowse
15377at6073Complete926.8550.0aflo_s0101.g21.t1E3 ubiquitin-protein ligase RNF139-likeJBrowse
15413at6073Fragmented708.5484.0aflo_s0013.g86.t2coiled-coil domain-containing protein 81JBrowse
15514at6073Complete603.1316.0aflo_s0011.g135.t1L-serine dehydratase/L-threonine deaminase-likeJBrowse
15518at6073Complete484.8298.0aflo_s0024.g67.t117-beta-hydroxysteroid dehydrogenase 13JBrowse
15583at6073Fragmented617.1414.0aflo_s0504.g4.t1mucosa-associated lymphoid tissue lymphoma translocation protein 1JBrowse
15592at6073Complete452.1339.0aflo_s0138.g9.t1Proline-rich AKT1 substrate 1JBrowse
15596at6073Complete802.4501.0aflo_s0011.g44.t1G patch domain-containing protein 3JBrowse
15604at6073Complete590.9388.0aflo_s0189.g11.t1sprT-like domain-containing protein SpartanJBrowse
15702at6073Complete987.8467.0aflo_s0184.g2.t1Acid-sensing ion channel 2JBrowse
15713at6073Complete343.3200.0aflo_s0155.g51.t1mitotic spindle assembly checkpoint protein MAD2B-likeJBrowse
15834at6073Complete409.2270.0aflo_s0112.g10.t1ubiquitin-conjugating enzyme E2 U-likeJBrowse
15842at6073Complete1109.6545.0aflo_s0398.g18.t1cAMP-specific 3',5'-cyclic phosphodiesterase 4C-likeJBrowse
Go to page: of 170 pages
TOP