BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
15312at6073Complete239.7133.0aint_s0583.g4.t1Mitochondrial intermembrane space import and assembly protein 40JBrowse
15346at6073Complete416.7238.0aint_s0038.g60.t1protein C1orf43 homologJBrowse
15348at6073Duplicated278.5166.0aint_s0133.g22.t2YY1-associated factor 2JBrowse
15348at6073Duplicated260.2147.0aint_s0133.g22.t1YY1-associated factor 2JBrowse
15359at6073Complete411.5219.0aint_s0105.g30.t1EKC/KEOPS complex subunit TP53RKJBrowse
15362at6073Duplicated1485.6852.0aint_s0199.g41.t2diacylglycerol kinase theta-likeJBrowse
15362at6073Duplicated1485.5852.0aint_s0199.g41.t1diacylglycerol kinase theta-likeJBrowse
15377at6073Complete928.3550.0aint_s0099.g44.t1E3 ubiquitin-protein ligase RNF139-likeJBrowse
15413at6073Fragmented711.1484.0aint_s0019.g19.t1coiled-coil domain-containing protein 81JBrowse
15514at6073Complete603.7316.0aint_s0054.g85.t1L-serine dehydratase/L-threonine deaminase-likeJBrowse
15518at6073Complete482.3298.0aint_s0001.g143.t117-beta-hydroxysteroid dehydrogenase 13JBrowse
15583at6073Fragmented749.6518.0aint_s0325.g5.t1mucosa-associated lymphoid tissue lymphoma translocation protein 1JBrowse
15592at6073Complete450.1339.0aint_s0004.g8.t1Proline-rich AKT1 substrate 1JBrowse
15596at6073Complete798.4499.0aint_s0023.g87.t1G patch domain-containing protein 3JBrowse
15702at6073Complete987.8467.0aint_s0488.g12.t1Acid-sensing ion channel 2JBrowse
15713at6073Complete343.3200.0aint_s0438.g14.t1mitotic spindle assembly checkpoint protein MAD2B-likeJBrowse
15834at6073Fragmented431.5209.0aint_s0090.g10.t1ubiquitin-conjugating enzyme E2 U-likeJBrowse
15842at6073Duplicated1215.2635.0aint_s0116.g67.t2cAMP-specific 3',5'-cyclic phosphodiesterase 4C-likeJBrowse
15842at6073Duplicated1214.0635.0aint_s0116.g67.t3cAMP-specific 3',5'-cyclic phosphodiesterase 4C-likeJBrowse
15842at6073Duplicated1212.9635.0aint_s0116.g67.t4cAMP-specific 3',5'-cyclic phosphodiesterase 4C-likeJBrowse
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