BUSCO Gene Details in Acropora microphthalma

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora microphthalmaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.8% [S: 69.1%, D: 11.7%] F: 10.9%, M: 8.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,588 (80.8%)2,212 (69.1%)376 (11.7%)348 (10.9%)267 (8.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora microphthalma: 3,406 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
14913at6073Complete435.5218.0amic_s0035.g30.t1protein C9orf135JBrowse
14925at6073Complete511.0257.0amic_s0064.g60.t160S ribosomal protein L7a-likeJBrowse
14968at6073Complete427.4201.0amic_s0184.g21.t1B9 domain-containing 1JBrowse
14987at6073Complete626.0384.0amic_s0070.g75.t1insulinoma-associated protein 1a-likeJBrowse
15013at6073Fragmented395.2230.0amic_s0101.g16.t1Cyclin-like domainJBrowse
15026at6073Complete705.4393.0amic_s0013.g138.t1DUF21 domain-containing protein At4g33700-likeJBrowse
15044at6073Fragmented602.5287.0amic_s0265.g10.t1Isocitrate dehydrogenase JBrowse
15093at6073Complete579.5356.0amic_s0081.g7.t1rho GTPase-activating syd-1-likeJBrowse
15136at6073Fragmented730.3324.0amic_s0047.g42.t1U4/U6 small nuclear ribonucleoprotein Prp4-likeJBrowse
15162at6073Complete191.5108.0amic_s0031.g16.t1eukaryotic translation initiation factor 1JBrowse
15222at6073Complete778.2445.0amic_s0014.g104.t1GTPase HflX, N-terminalJBrowse
15248at6073Complete458.9221.0amic_s0098.g29.t1vesicle-associated membrane protein 7JBrowse
15312at6073Complete239.6134.0amic_s0060.g10.t1Mitochondrial intermembrane space import and assembly protein 40JBrowse
15346at6073Complete417.0238.0amic_s0412.g5.t1protein C1orf43 homologJBrowse
15348at6073Duplicated277.3166.0amic_s0040.g190.t1YY1-associated factor 2JBrowse
15348at6073Duplicated259.1147.0amic_s0040.g190.t2YY1-associated factor 2JBrowse
15359at6073Complete407.6219.0amic_s0191.g17.t1EKC/KEOPS complex subunit TP53RKJBrowse
15362at6073Fragmented1116.6643.0amic_s0127.g17.t2diacylglycerol kinase theta-likeJBrowse
15377at6073Complete930.5550.0amic_s0034.g44.t1E3 ubiquitin-protein ligase RNF139-likeJBrowse
15413at6073Duplicated1176.8695.0amic_s0024.g38.t1coiled-coil domain-containing protein 81JBrowse
Go to page: of 171 pages
TOP