BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
9539at6073Duplicated390.7228.0XP_074613628.1copper homeostasis protein cutC homologJBrowse
9560at6073Complete258.9145.0XP_074631758.1protein cornichon homolog 4JBrowse
9593at6073Complete800.6364.0XP_074613620.1developmentally-regulated GTP-binding protein 2JBrowse
9621at6073Complete629.3311.0XP_074631696.1DNA-directed RNA polymerase III subunit RPC6-likeJBrowse
9633at6073Duplicated1135.3802.0XP_074622796.1WD repeat-containing protein 75JBrowse
9633at6073Duplicated980.2680.0XP_074622797.1WD repeat-containing protein 75JBrowse
9660at6073Complete1453.1723.0XP_074631048.1Ribosomal protein S6 kinase alpha-5JBrowse
9703at6073Duplicated953.9552.0XP_074615899.1serine/threonine-protein kinase Nek11JBrowse
9703at6073Duplicated953.9552.0XP_074615900.1serine/threonine-protein kinase Nek11JBrowse
9703at6073Duplicated827.6481.0XP_074615901.1serine/threonine-protein kinase Nek11JBrowse
9733at6073Duplicated210.2187.0XP_074613233.1cyclin-dependent kinase inhibitor 1-likeJBrowse
9733at6073Duplicated210.2187.0XP_074613234.1cyclin-dependent kinase inhibitor 1-likeJBrowse
9733at6073Duplicated210.2187.0XP_074613235.1cyclin-dependent kinase inhibitor 1-likeJBrowse
9733at6073Duplicated210.0187.0XP_074613232.1cyclin-dependent kinase inhibitor 1-likeJBrowse
9775at6073Complete1139.8804.0XP_074626656.1MAP/microtubule affinity-regulating kinase 3-likeJBrowse
9777at6073Complete796.5400.0XP_074622084.1Protein farnesyltransferase subunit betaJBrowse
9852at6073Complete620.9333.0XP_074626915.1solute carrier family 35 member E2A-likeJBrowse
9931at6073Complete538.9408.0XP_074609726.1nuclear-interacting partner of ALKJBrowse
9934at6073Complete815.7462.0XP_074621062.1Alpha-(1,3)-fucosyltransferase 10JBrowse
9941at6073Complete276.6173.0XP_074624673.1uncharacterized protein LOC130613352 isoform X1JBrowse
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