BUSCO Gene Details in Cyphastrea salae

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Cyphastrea salaeBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 95.3% [S: 69.6%, D: 25.7%] F: 3.0%, M: 1.7%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,051 (95.3%)2,229 (69.6%)822 (25.7%)97 (3.0%)55 (1.7%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Cyphastrea salae: 4,072 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
11802at6073Duplicated883.1521.0ENSOFVP00000016238.1mitochondrial-processing peptidase subunit alphaJBrowse
11802at6073Duplicated891.8435.0ENSOFVP00000016221.1mitochondrial-processing peptidase subunit alphaJBrowse
11834at6073Complete400.0210.0ENSOFVP00000016900.1UPF0428 protein CXorf56JBrowse
11852at6073Complete204.2120.0ENSOFVP00000027956.128S ribosomal protein S6, mitochondrial-likeJBrowse
11858at6073Complete807.3373.0ENSOFVP00000001264.1Casein kinase II subunit alphaJBrowse
11940at6073Complete583.7302.0ENSOFVP00000003006.1solute carrier family 35 member E3-likeJBrowse
11943at6073Duplicated912.9546.0ENSOFVP00000023072.1TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5LJBrowse
11943at6073Duplicated912.9546.0ENSOFVP00000023081.1TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5LJBrowse
12015at6073Complete764.7464.0ENSOFVP00000007793.1DNA-(apurinic or apyrimidinic site) endonuclease 2JBrowse
12054at6073Complete254.1147.0ENSOFVP00000026848.1glutaredoxin-related 5, mitochondrialJBrowse
12093at6073Complete1198.0674.0ENSOFVP00000006295.1tyrosine-protein kinase HTK16JBrowse
12106at6073Duplicated942.8490.0ENSOFVP00000037828.1GATA-binding factor 2-likeJBrowse
12106at6073Duplicated802.8421.0ENSOFVP00000037824.1GATA-binding factor 2-likeJBrowse
12121at6073Complete449.8348.0ENSOFVP00000015642.1Ectonucleoside triphosphate diphosphohydrolase 5JBrowse
12142at6073Complete590.5281.0ENSOFVP00000015090.1Golgi phosphoprotein 3-likeJBrowse
12150at6073Fragmented615.2353.0ENSOFVP00000032056.1protein smoothened-likeJBrowse
12151at6073Complete1602.8958.0ENSOFVP00000033742.1F-box/WD repeat-containing protein 10JBrowse
12222at6073Complete734.1462.0ENSOFVP00000031493.1MORN repeat-containing protein 1JBrowse
12286at6073Duplicated534.51011.0ENSOFVP00000025045.1integrinJBrowse
12286at6073Duplicated517.71007.0ENSOFVP00000021866.1integrinJBrowse
Go to page: of 204 pages
TOP