BUSCO Gene Details in Acropora echinata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora echinataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 79.0% [S: 66.3%, D: 12.6%] F: 12.4%, M: 8.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,530 (79.0%)2,125 (66.3%)405 (12.6%)397 (12.4%)276 (8.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora echinata: 3,435 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
15093at6073Complete579.2356.0aech_s0177.g86.t1rho GTPase-activating syd-1-likeJBrowse
15136at6073Complete1062.9514.0aech_s0037.g62.t1U4/U6 small nuclear ribonucleoprotein Prp4-likeJBrowse
15162at6073Complete191.5108.0aech_s0295.g3.t1eukaryotic translation initiation factor 1JBrowse
15222at6073Complete778.0445.0aech_s0021.g125.t1GTPase HflX, N-terminalJBrowse
15248at6073Complete457.5221.0aech_s0028.g20.t1vesicle-associated membrane protein 7JBrowse
15312at6073Complete240.0135.0aech_s0035.g112.t1Mitochondrial intermembrane space import and assembly protein 40JBrowse
15346at6073Complete416.5237.0aech_s0104.g64.t1protein C1orf43 homologJBrowse
15348at6073Duplicated279.7166.0aech_s0014.g114.t2YY1-associated factor 2JBrowse
15348at6073Duplicated261.4147.0aech_s0014.g114.t1YY1-associated factor 2JBrowse
15359at6073Complete410.5219.0aech_s0413.g2.t1EKC/KEOPS complex subunit TP53RKJBrowse
15362at6073Duplicated1489.5852.0aech_s0128.g5.t1diacylglycerol kinase theta-likeJBrowse
15362at6073Duplicated1489.2852.0aech_s0128.g5.t2diacylglycerol kinase theta-likeJBrowse
15377at6073Complete931.1550.0aech_s0015.g85.t1E3 ubiquitin-protein ligase RNF139-likeJBrowse
15413at6073Fragmented639.8407.0aech_s0003.g355.t1coiled-coil domain-containing protein 81JBrowse
15514at6073Complete605.6315.0aech_s0011.g385.t1L-serine dehydratase/L-threonine deaminase-likeJBrowse
15518at6073Duplicated356.2299.0aech_s0128.g19.t117-beta-hydroxysteroid dehydrogenase 13JBrowse
15518at6073Duplicated356.0297.0aech_s0128.g18.t117-beta-hydroxysteroid dehydrogenase 13JBrowse
15518at6073Duplicated356.0297.0aech_s0128.g18.t217-beta-hydroxysteroid dehydrogenase 13JBrowse
15583at6073Fragmented488.3190.0aech_s0014.g191.t3mucosa-associated lymphoid tissue lymphoma translocation protein 1JBrowse
15592at6073Duplicated465.9339.0aech_s0032.g31.t2Proline-rich AKT1 substrate 1JBrowse
Go to page: of 172 pages
TOP