BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
15842at6073Duplicated1213.6634.0aint_s0116.g67.t1cAMP-specific 3',5'-cyclic phosphodiesterase 4C-likeJBrowse
15844at6073Complete884.6479.0aint_s0217.g4.t1uncharacterized protein LOC110233383 isoform X1JBrowse
15944at6073Complete737.9348.0aint_s0042.g64.t1cyclin-dependent kinase 20JBrowse
15948at6073Complete1118.7637.0aint_s0777.g3.t1leucine-rich repeat and guanylate kinase domain-containing proteinJBrowse
15954at6073Complete257.2174.0aint_s0051.g50.t1BLOC-1-related complex subunit 5JBrowse
15990at6073Fragmented246.3148.0aint_s0455.g14.t1RNA 3 -terminal phosphate cyclaseJBrowse
16004at6073Fragmented1276.1721.0aint_s0239.g4.t1nuclear pore complex protein Nup107-likeJBrowse
16097at6073Complete572.5336.0aint_s0069.g80.t1aldose 1-epimeraseJBrowse
16189at6073Complete1529.0776.0aint_s0076.g37.t1E3 ubiquitin-protein ligase trim71JBrowse
16197at6073Complete1043.8798.0aint_s0041.g78.t1anillinJBrowse
16222at6073Complete241.9142.0aint_s0017.g73.t1protein FAM136AJBrowse
16272at6073Complete821.4470.0aint_s0001.g140.t1lysophospholipid acyltransferase 5-likeJBrowse
16274at6073Complete421.1227.0aint_s0019.g77.t1uracil phosphoribosyltransferase homologJBrowse
16289at6073Fragmented312.7248.0aint_s0032.g57.t1hyccin-likeJBrowse
16329at6073Complete947.5580.0aint_s0654.g3.t1protein FAM227A-likeJBrowse
16359at6073Complete312.9188.0aint_s0184.g29.t1spermatogenesis-associated protein 24JBrowse
16385at6073Complete189.5204.0aint_s0044.g75.t1uncharacterized protein LOC111325656 isoform X1JBrowse
16411at6073Complete808.0675.0aint_s0089.g42.t1zinc finger protein 208JBrowse
16457at6073Complete537.6274.0aint_s0020.g37.t1exosome complex exonuclease RRP42-likeJBrowse
16462at6073Complete795.8452.0aint_s0337.g9.t1cyclin-dependent kinase 14-likeJBrowse
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