BUSCO Gene Details in Acropora loripes

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora loripesBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.5% [S: 82.8%, D: 6.7%] F: 6.9%, M: 3.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,868 (89.5%)2,652 (82.8%)216 (6.7%)221 (6.9%)114 (3.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora loripes: 3,324 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
15604at6073Complete590.0388.0alor_g8506.t1sprT-like domain-containing protein SpartanJBrowse
15702at6073Complete806.5418.0alor_g931.t1Acid-sensing ion channel 2JBrowse
15713at6073Complete345.5200.0alor_g1583.t1mitotic spindle assembly checkpoint protein MAD2B-likeJBrowse
15834at6073Complete467.3303.0alor_g12130.t1ubiquitin-conjugating enzyme E2 U-likeJBrowse
15842at6073Fragmented1025.0512.0alor_g16928.t1cAMP-specific 3',5'-cyclic phosphodiesterase 4C-likeJBrowse
15844at6073Complete849.9444.0alor_g26966.t1uncharacterized protein LOC110233383 isoform X1JBrowse
15944at6073Complete676.8321.0alor_g20702.t1cyclin-dependent kinase 20JBrowse
15948at6073Complete1249.4759.0alor_g20726.t1leucine-rich repeat and guanylate kinase domain-containing proteinJBrowse
15954at6073Complete256.7174.0alor_g21989.t1BLOC-1-related complex subunit 5JBrowse
15990at6073Complete645.6356.0alor_g16910.t1RNA 3 -terminal phosphate cyclaseJBrowse
16004at6073Complete1444.3905.0alor_g4814.t1nuclear pore complex protein Nup107-likeJBrowse
16052at6073Complete426.2421.0alor_g21118.t1uncharacterized protein LOC116304310 isoform X1JBrowse
16097at6073Complete472.4291.0alor_g26859.t1aldose 1-epimeraseJBrowse
16115at6073Complete1282.5605.0alor_g23977.t1ATP-binding cassette sub-family B member 7, mitochondrialJBrowse
16189at6073Complete1520.2761.0alor_g3385.t1E3 ubiquitin-protein ligase trim71JBrowse
16222at6073Complete241.4142.0alor_g9942.t1protein FAM136AJBrowse
16272at6073Complete669.5405.0alor_g23392.t1lysophospholipid acyltransferase 5-likeJBrowse
16274at6073Complete422.3227.0alor_g6504.t1uracil phosphoribosyltransferase homologJBrowse
16289at6073Complete656.4441.0alor_g14463.t1hyccin-likeJBrowse
16329at6073Complete981.0607.0alor_g9669.t1protein FAM227A-likeJBrowse
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