BUSCO Gene Details in Acropora microphthalma

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora microphthalmaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.8% [S: 69.1%, D: 11.7%] F: 10.9%, M: 8.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,588 (80.8%)2,212 (69.1%)376 (11.7%)348 (10.9%)267 (8.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora microphthalma: 3,406 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
15413at6073Duplicated1174.6695.0amic_s0024.g38.t2coiled-coil domain-containing protein 81JBrowse
15514at6073Complete600.8316.0amic_s0161.g51.t1L-serine dehydratase/L-threonine deaminase-likeJBrowse
15518at6073Complete482.7298.0amic_s0025.g2.t117-beta-hydroxysteroid dehydrogenase 13JBrowse
15583at6073Fragmented572.7372.0amic_s0122.g3.t1mucosa-associated lymphoid tissue lymphoma translocation protein 1JBrowse
15592at6073Complete391.7304.0amic_s0128.g26.t1Proline-rich AKT1 substrate 1JBrowse
15596at6073Complete798.4501.0amic_s0038.g35.t1G patch domain-containing protein 3JBrowse
15604at6073Complete588.3388.0amic_s0186.g11.t1sprT-like domain-containing protein SpartanJBrowse
15702at6073Complete988.6467.0amic_s0104.g9.t1Acid-sensing ion channel 2JBrowse
15713at6073Complete345.6200.0amic_s0318.g17.t1mitotic spindle assembly checkpoint protein MAD2B-likeJBrowse
15834at6073Fragmented279.8209.0amic_s0044.g52.t1ubiquitin-conjugating enzyme E2 U-likeJBrowse
15842at6073Duplicated1215.2635.0amic_s0169.g115.t1cAMP-specific 3',5'-cyclic phosphodiesterase 4C-likeJBrowse
15842at6073Duplicated1214.0635.0amic_s0169.g115.t2cAMP-specific 3',5'-cyclic phosphodiesterase 4C-likeJBrowse
15842at6073Duplicated1213.3635.0amic_s0169.g115.t4cAMP-specific 3',5'-cyclic phosphodiesterase 4C-likeJBrowse
15842at6073Duplicated1213.6634.0amic_s0169.g115.t3cAMP-specific 3',5'-cyclic phosphodiesterase 4C-likeJBrowse
15844at6073Complete880.4479.0amic_s0007.g33.t1uncharacterized protein LOC110233383 isoform X1JBrowse
15944at6073Complete675.1330.0amic_s0040.g15.t1cyclin-dependent kinase 20JBrowse
15948at6073Complete1127.6637.0amic_s0164.g15.t1leucine-rich repeat and guanylate kinase domain-containing proteinJBrowse
15954at6073Complete257.0175.0amic_s0102.g80.t1BLOC-1-related complex subunit 5JBrowse
15990at6073Complete257.4354.0amic_s0010.g8.t1RNA 3 -terminal phosphate cyclaseJBrowse
16004at6073Complete1624.6952.0amic_s0269.g12.t1nuclear pore complex protein Nup107-likeJBrowse
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