BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
9964at6073Duplicated2609.91599.0XP_074636503.1GREB1-like proteinJBrowse
9964at6073Duplicated2609.61599.0XP_074636501.1GREB1-like proteinJBrowse
9964at6073Duplicated2609.61599.0XP_074636502.1GREB1-like proteinJBrowse
10077at6073Complete774.5467.0XP_074630383.1serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit BJBrowse
10157at6073Complete408.5250.0XP_074636087.1uncharacterized protein LOC124809034JBrowse
10181at6073Duplicated318.2241.0XP_074606654.1uncharacterized protein LOC116286471JBrowse
10181at6073Duplicated314.7236.0XP_074606653.1uncharacterized protein LOC116286471JBrowse
10192at6073Duplicated807.0441.0XP_074606704.1V-type proton ATPase subunit HJBrowse
10192at6073Duplicated807.0441.0XP_074606705.1V-type proton ATPase subunit HJBrowse
10192at6073Duplicated762.4410.0XP_074606707.1V-type proton ATPase subunit HJBrowse
10196at6073Complete412.7262.0XP_074612585.1trimeric intracellular cation channel typeJBrowse
10202at6073Complete1053.7510.0XP_074634532.1Importin subunit alpha-3JBrowse
10213at6073Complete270.1161.0XP_074630216.1CB1 cannabinoid receptor-interacting protein 1JBrowse
10225at6073Complete300.1203.0XP_074627426.1nucleoside diphosphate-linked moiety X motif 8-likeJBrowse
10231at6073Complete1004.3623.0XP_074620100.1alkylated DNA repair protein alkB homolog 8-likeJBrowse
10260at6073Complete927.0492.0XP_074616826.1probable aminopeptidase NPEPL1JBrowse
10283at6073Duplicated1193.9613.0XP_074613638.1solute carrier organic anion transporter family member 4A1-likeJBrowse
10283at6073Duplicated1193.9613.0XP_074613639.1solute carrier organic anion transporter family member 4A1-likeJBrowse
10283at6073Duplicated1193.9613.0XP_074613640.1solute carrier organic anion transporter family member 4A1-likeJBrowse
10283at6073Duplicated1193.9613.0XP_074613641.1solute carrier organic anion transporter family member 4A1-likeJBrowse
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