BUSCO Gene Details in Hydra oligactis

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Hydra oligactisBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.2% [S: 66.0%, D: 7.2%] F: 13.3%, M: 13.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,344 (73.2%)2,115 (66.0%)229 (7.2%)427 (13.3%)432 (13.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Hydra oligactis: 3,025 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
17485at6073Complete542.3494.0HOLI02057.G34260inactive ubiquitin carboxyl-terminal hydrolase 54-likeJBrowse
17520at6073Complete713.8463.0HOLI01089.G46102Coiled-coil domain-containing protein 77JBrowse
17523at6073Fragmented560.7397.0HOLI00040.G48862conserved oligomeric Golgi complex subunit 8JBrowse
17529at6073Fragmented579.4430.0HOLI00666.G47324RUN and FYVE domain-containing protein 1JBrowse
17543at6073Complete232.7203.0HOLI03121.G36175uncharacterized protein LOC114952910JBrowse
17564at6073Duplicated269.2224.0HOLI03563.G45177RPA-interacting protein AJBrowse
17564at6073Duplicated268.8224.0HOLI03947.G6985RPA-interacting protein AJBrowse
17567at6073Complete790.3461.0HOLI00612.G24355major facilitator superfamily domain-containing protein 6JBrowse
17590at6073Complete308.9286.0HOLI02066.G24172E3 ubiquitin-protein ligase RNF34JBrowse
17591at6073Fragmented722.3592.0HOLI00788.G33746RNA-binding protein 15JBrowse
17606at6073Fragmented814.3360.0HOLI01319.G32969NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domainJBrowse
17629at6073Complete489.7688.0HOLI00367.G38680glycerol-3-phosphate acyltransferase 1, mitochondrial-likeJBrowse
17637at6073Complete686.6543.0HOLI03203.G28036T-cell immunomodulatory protein-likeJBrowse
17759at6073Complete387.2288.0HOLI00263.G26776Elongation factor Ts, mitochondrialJBrowse
17781at6073Complete573.1360.0HOLI00206.G7645zinc finger protein 277JBrowse
17839at6073Complete280.5163.0HOLI00099.G13390density-regulated protein homologJBrowse
17863at6073Complete332.8207.0HOLI00391.G12196DNA replication complex GINS protein SLD5JBrowse
17866at6073Fragmented1289.7571.0HOLI00259.G25462transitional endoplasmic reticulum ATPaseJBrowse
17892at6073Complete853.2472.0HOLI00649.G24875serine/threonine-protein kinase N2-likeJBrowse
17922at6073Complete1063.5634.0HOLI01820.G54181E3 ubiquitin-protein ligase traf7JBrowse
Go to page: of 152 pages
TOP