BUSCO Gene Details in Paramuricea clavata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Paramuricea clavataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 78.5% [S: 64.6%, D: 13.9%] F: 17.4%, M: 4.1%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,513 (78.5%)2,069 (64.6%)444 (13.9%)558 (17.4%)132 (4.1%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Paramuricea clavata: 3,572 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
14525at6073Duplicated178.6517.0CAB4024548.1Aspartate--tRNA ligase, cytoplasmicJBrowse
14525at6073Duplicated180.4516.0CAB4015893.1Aspartate--tRNA ligase, cytoplasmicJBrowse
14562at6073Fragmented283.2151.0CAB3992567.1ubiquitin-conjugating enzyme E2 SJBrowse
14574at6073Complete656.6372.0CAB4018483.1glucose-fructose oxidoreductase domain-containing protein 1JBrowse
14606at6073Complete925.1484.0CAB4025733.1uncharacterized protein LOC116289408JBrowse
14608at6073Complete649.1277.0CAB4013661.1ras-related GTP-binding protein AJBrowse
14620at6073Complete654.8368.0CAB3980796.1Terminal nucleotidyltransferase 5CJBrowse
14673at6073Fragmented999.1722.0CAB4015811.1nuclear pore complex protein Nup133-likeJBrowse
14741at6073Complete428.4231.0CAB4017988.1Eukaryotic translation initiation factor 4E type 2JBrowse
14751at6073Complete893.5454.0CAB3999674.1Golgi pH regulator AJBrowse
14768at6073Duplicated676.5514.0CAB3979412.1protein FAM214A-likeJBrowse
14768at6073Duplicated673.5514.0CAB3979413.1protein FAM214A-likeJBrowse
14781at6073Duplicated1070.8554.0CAB3994413.160 kDa heat shock protein, mitochondrialJBrowse
14781at6073Duplicated1069.7553.0CAB3994414.160 kDa heat shock protein, mitochondrialJBrowse
14810at6073Complete188.5104.0CAB4033627.160S ribosomal protein L34JBrowse
14816at6073Complete274.6223.0CAB3983633.1kinetochore protein Spc25-likeJBrowse
14845at6073Fragmented238.9168.0CAB4021111.1Ribosomal RNA-processing protein 7 AJBrowse
14848at6073Duplicated1475.5912.0CAB3995408.1WD repeat-containing protein 64-likeJBrowse
14848at6073Duplicated1473.7912.0CAB3995409.1WD repeat-containing protein 64-likeJBrowse
14896at6073Complete323.0231.0CAB3994536.1lysosomal-associated transmembrane 4A-likeJBrowse
Go to page: of 179 pages
TOP