BUSCO Gene Details in Acropora gemmifera

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora gemmiferaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 78.8% [S: 65.8%, D: 13.0%] F: 12.3%, M: 8.9%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,524 (78.8%)2,109 (65.8%)415 (13.0%)395 (12.3%)284 (8.9%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora gemmifera: 3,444 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
15842at6073Duplicated1213.6634.0agem_s0245.g16.t1cAMP-specific 3',5'-cyclic phosphodiesterase 4C-likeJBrowse
15844at6073Complete882.8479.0agem_s0084.g57.t1uncharacterized protein LOC110233383 isoform X1JBrowse
15944at6073Complete737.9348.0agem_s0019.g17.t1cyclin-dependent kinase 20JBrowse
15948at6073Complete1124.8637.0agem_s0072.g18.t1leucine-rich repeat and guanylate kinase domain-containing proteinJBrowse
15954at6073Complete256.9165.0agem_s0033.g19.t1BLOC-1-related complex subunit 5JBrowse
15990at6073Fragmented244.7148.0agem_s0245.g32.t1RNA 3 -terminal phosphate cyclaseJBrowse
16004at6073Fragmented1207.0626.0agem_s0043.g51.t1nuclear pore complex protein Nup107-likeJBrowse
16052at6073Complete652.1509.0agem_s0096.g65.t2uncharacterized protein LOC116304310 isoform X1JBrowse
16097at6073Complete574.1336.0agem_s0045.g25.t1aldose 1-epimeraseJBrowse
16115at6073Complete1282.6605.0agem_s0020.g23.t1ATP-binding cassette sub-family B member 7, mitochondrialJBrowse
16189at6073Complete1527.1776.0agem_s0037.g17.t1E3 ubiquitin-protein ligase trim71JBrowse
16197at6073Complete1030.4794.0agem_s0037.g88.t1anillinJBrowse
16222at6073Complete240.1142.0agem_s0042.g56.t1protein FAM136AJBrowse
16272at6073Duplicated600.4462.0agem_s0107.g3.t1lysophospholipid acyltransferase 5-likeJBrowse
16272at6073Duplicated654.8381.0agem_s0107.g2.t1lysophospholipid acyltransferase 5-likeJBrowse
16274at6073Complete197.3212.0agem_s0110.g69.t1uracil phosphoribosyltransferase homologJBrowse
16289at6073Fragmented311.3248.0agem_s0008.g158.t1hyccin-likeJBrowse
16329at6073Complete984.1607.0agem_s0448.g3.t1protein FAM227A-likeJBrowse
16359at6073Complete313.4189.0agem_s0001.g341.t1spermatogenesis-associated protein 24JBrowse
16385at6073Complete190.5204.0agem_s0012.g27.t1uncharacterized protein LOC111325656 isoform X1JBrowse
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