BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
16511at6073Duplicated615.3339.0aint_s0031.g26.t1insulin gene enhancer protein ISL-1-likeJBrowse
16511at6073Duplicated601.9328.0aint_s0031.g26.t2insulin gene enhancer protein ISL-1-likeJBrowse
16531at6073Complete316.8275.0aint_s0203.g15.t1fasciculation and elongation protein zeta-2-likeJBrowse
16533at6073Complete568.1300.0aint_s0167.g10.t1Ribosome production factor 1JBrowse
16561at6073Complete1715.5831.0aint_s0144.g31.t1intraflagellar transport protein 88 homologJBrowse
16570at6073Complete175.8105.0aint_s0178.g50.t1glutaredoxin-like protein C5orf63 homologJBrowse
16601at6073Complete833.0590.0aint_s0029.g10.t1BRCA1-associated RING domain protein 1JBrowse
16629at6073Fragmented799.0468.0aint_s0264.g7.t1ankyrin repeat domain-containing protein 13D-likeJBrowse
16631at6073Duplicated864.2399.0aint_s0001.g106.t1Cyclin-dependent kinase 8JBrowse
16631at6073Duplicated852.8395.0aint_s0001.g106.t2Cyclin-dependent kinase 8JBrowse
16631at6073Duplicated852.1379.0aint_s0001.g106.t3Cyclin-dependent kinase 8JBrowse
16635at6073Complete1158.9702.0aint_s0061.g42.t1Double zinc ribbon and ankyrin repeat-containing 1JBrowse
16676at6073Complete1065.2439.0aint_s0518.g8.t1Methyltransferase-like protein 25JBrowse
16788at6073Fragmented433.0241.0aint_s0130.g33.t1protein SCAI-likeJBrowse
16884at6073Complete400.1246.0aint_s0069.g5.t1paired mesoderm homeobox protein 2JBrowse
16906at6073Duplicated1282.3817.0aint_s0184.g10.t1Serine/threonine-protein phosphatase 6 regulatory subunit 3-AJBrowse
16906at6073Duplicated1279.3817.0aint_s0184.g10.t2Serine/threonine-protein phosphatase 6 regulatory subunit 3-AJBrowse
16997at6073Complete164.6105.0aint_s0099.g60.t1HIG1 domain family member 2A, mitochondrialJBrowse
17010at6073Complete1120.8551.0aint_s0679.g3.t1dual specificity tyrosine-phosphorylation-regulated kinase 2JBrowse
17013at6073Complete479.4374.0aint_s0356.g31.t1mediator of RNA polymerase II transcription subunit 26JBrowse
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