BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
10348at6073Complete319.4178.0XP_074623695.1Pancreas transcription factor 1 subunit alphaJBrowse
10369at6073Complete439.8218.0XP_074615050.1nucleoside diphosphate kinase homolog 5JBrowse
10403at6073Duplicated1227.4690.0XP_074633512.1Serine/threonine-protein kinase sik2JBrowse
10403at6073Duplicated1227.4690.0XP_074633513.1Serine/threonine-protein kinase sik2JBrowse
10403at6073Duplicated1227.3690.0XP_074633509.1Serine/threonine-protein kinase sik2JBrowse
10403at6073Duplicated1227.2690.0XP_074633510.1Serine/threonine-protein kinase sik2JBrowse
10403at6073Duplicated1225.6689.0XP_074633514.1Serine/threonine-protein kinase sik2JBrowse
10404at6073Complete4654.82338.0XP_074619017.1CCR4-NOT transcription complex subunit 1JBrowse
10411at6073Duplicated496.2322.0XP_074630526.1CST complex subunit STN1-likeJBrowse
10411at6073Duplicated496.2322.0XP_074630527.1CST complex subunit STN1-likeJBrowse
10422at6073Duplicated547.6343.0XP_074633918.1activating signal cointegrator 1 complex subunitJBrowse
10422at6073Duplicated510.7325.0XP_074633920.1activating signal cointegrator 1 complex subunitJBrowse
10422at6073Duplicated507.5314.0XP_074633919.1activating signal cointegrator 1 complex subunitJBrowse
10422at6073Duplicated503.2298.0XP_074633921.1activating signal cointegrator 1 complex subunitJBrowse
10506at6073Complete584.8353.0XP_074636079.1LIM/homeobox protein Lhx1-likeJBrowse
10512at6073Complete490.9252.0XP_074618354.1plasmanylethanolamine desaturaseJBrowse
10571at6073Complete579.4387.0XP_074629810.1suppressor APC domain-containing protein 2-likeJBrowse
10748at6073Duplicated559.4321.0XP_074637469.1cytosolic arginine sensor for mTORC1 subunit 1-likeJBrowse
10748at6073Duplicated547.1321.0XP_074637470.1cytosolic arginine sensor for mTORC1 subunit 1-likeJBrowse
10748at6073Duplicated541.8314.0XP_074637468.1cytosolic arginine sensor for mTORC1 subunit 1-likeJBrowse
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