BUSCO Gene Details in Hydra oligactis

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Hydra oligactisBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.2% [S: 66.0%, D: 7.2%] F: 13.3%, M: 13.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,344 (73.2%)2,115 (66.0%)229 (7.2%)427 (13.3%)432 (13.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Hydra oligactis: 3,025 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
17927at6073Complete655.5374.0HOLI00623.G22542cAMP-dependent protein kinase type II regulatory subunit-likeJBrowse
17995at6073Complete1536.7821.0HOLI01137.G12214protein disulfide-isomerase A5-likeJBrowse
18121at6073Complete146.6200.0HOLI09138.G54608zinc finger CCCH domain-containing protein 15JBrowse
18130at6073Fragmented306.2328.0HOLI00854.G58082tRNA-specific adenosine deaminase 1JBrowse
18146at6073Complete750.9506.0HOLI00063.G56080pumilio homolog 3JBrowse
18237at6073Complete573.2360.0HOLI01072.G23434MAPK/MAK/MRK overlapping kinase-likeJBrowse
18253at6073Complete354.6265.0HOLI00216.G41244ribonuclease H1JBrowse
18254at6073Duplicated596.3589.0HOLI00498.G48531uncharacterized protein LOC116290784JBrowse
18254at6073Duplicated540.9569.0HOLI00498.G48528uncharacterized protein LOC116290784JBrowse
18355at6073Fragmented663.6361.0HOLI00064.G30776histidine--tRNA ligase, cytoplasmic-likeJBrowse
18402at6073Duplicated221.0154.0HOLI00549.G27148NADH dehydrogenase JBrowse
18402at6073Duplicated221.0154.0HOLI01640.G44588NADH dehydrogenase JBrowse
18458at6073Fragmented182.5148.0HOLI02583.G39779ribonuclease P protein subunit p29-likeJBrowse
18459at6073Complete267.0144.0HOLI00116.G41124trafficking protein particle complex subunit 2JBrowse
18482at6073Complete271.6180.0HOLI00344.G6811prenylated Rab acceptor protein 1JBrowse
18536at6073Complete168.998.0HOLI03322.G15501methionine-R-sulfoxide reductase B1JBrowse
18598at6073Complete454.9430.0HOLI00112.G35311GPI mannosyltransferase 2JBrowse
18600at6073Duplicated234.0198.0HOLI01239.G1657coiled-coil domain-containing protein 103JBrowse
18600at6073Duplicated232.5198.0HOLI00959.G3770coiled-coil domain-containing protein 103JBrowse
18664at6073Complete1633.51252.0HOLI00238.G34813transmembrane protein 131JBrowse
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