BUSCO Gene Details in Acropora loripes

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora loripesBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.5% [S: 82.8%, D: 6.7%] F: 6.9%, M: 3.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,868 (89.5%)2,652 (82.8%)216 (6.7%)221 (6.9%)114 (3.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora loripes: 3,324 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
16788at6073Fragmented434.6281.0alor_g4945.t1protein SCAI-likeJBrowse
16884at6073Complete400.8246.0alor_g16076.t1paired mesoderm homeobox protein 2JBrowse
16906at6073Duplicated1510.5926.0alor_g21832.t1Serine/threonine-protein phosphatase 6 regulatory subunit 3-AJBrowse
16906at6073Duplicated1509.5926.0alor_g21832.t2Serine/threonine-protein phosphatase 6 regulatory subunit 3-AJBrowse
16997at6073Complete166.3105.0alor_g4900.t1HIG1 domain family member 2A, mitochondrialJBrowse
17010at6073Complete1120.8551.0alor_g19441.t1dual specificity tyrosine-phosphorylation-regulated kinase 2JBrowse
17013at6073Complete481.1374.0alor_g10634.t1mediator of RNA polymerase II transcription subunit 26JBrowse
17053at6073Complete1308.3677.0alor_g8621.t1fermitin family homolog 2JBrowse
17075at6073Complete1160.0671.0alor_g5624.t1conserved oligomeric Golgi complex subunit 7JBrowse
17079at6073Fragmented530.8242.0alor_g18041.t1POU domain, class 4, transcription factor 3JBrowse
17115at6073Complete679.2411.0alor_g26659.t1Transcriptional adapter 3JBrowse
17124at6073Complete882.1483.0alor_g737.t1integrator complex subunit 14JBrowse
17128at6073Complete497.4255.0alor_g4984.t1malectinJBrowse
17141at6073Complete497.1315.0alor_g9327.t1vegetative incompatibility protein HET-E-1-likeJBrowse
17159at6073Complete474.8279.0alor_g1870.t1CBY1-interacting BAR domain-containing protein 1JBrowse
17166at6073Complete473.1236.0alor_g25942.t1ras-related protein Rab-23JBrowse
17167at6073Complete188.8119.0alor_g17593.t1uncharacterized protein C1orf189 homologJBrowse
17189at6073Complete982.6545.0alor_g16601.t1mitochondrial import receptor subunit TOM70JBrowse
17230at6073Complete1491.5821.0alor_g16063.t1dynein axonemal assembly factor 5JBrowse
17256at6073Fragmented834.8439.0alor_g11749.t1F-box/WD repeat-containing protein 7-likeJBrowse
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