BUSCO Gene Details in Hydractinia echinata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Hydractinia echinataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 92.2% [S: 34.9%, D: 57.2%] F: 4.8%, M: 3.1%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,952 (92.2%)1,119 (34.9%)1,833 (57.2%)152 (4.8%)99 (3.1%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Hydractinia echinata: 6,262 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
7950at6073Complete608.8301.0ENSDJXP00000017754.1WD repeat-containing protein 61JBrowse
7981at6073Duplicated856.6432.0ENSDJXP00000021516.1Eukaryotic translation initiation factor 3 subunit EJBrowse
7981at6073Duplicated757.4384.0ENSDJXP00000021525.1Eukaryotic translation initiation factor 3 subunit EJBrowse
8010at6073Duplicated1080.0723.0ENSDJXP00000023664.13-hydroxy-3-methylglutaryl-coenzyme A reductaseJBrowse
8010at6073Duplicated1075.9723.0ENSDJXP00000050814.13-hydroxy-3-methylglutaryl-coenzyme A reductaseJBrowse
8010at6073Duplicated1060.0723.0ENSDJXP00000023648.13-hydroxy-3-methylglutaryl-coenzyme A reductaseJBrowse
8010at6073Duplicated986.0624.0ENSDJXP00000023636.13-hydroxy-3-methylglutaryl-coenzyme A reductaseJBrowse
8027at6073Duplicated256.0204.0ENSDJXP00000013641.1MKRN2 opposite strand protein-likeJBrowse
8027at6073Duplicated255.4202.0ENSDJXP00000013638.1MKRN2 opposite strand protein-likeJBrowse
8063at6073Complete1926.01225.0ENSDJXP00000030266.1vigilin-likeJBrowse
8095at6073Duplicated239.4138.0ENSDJXP00000006150.1mediator of RNA polymerase II transcription subunit 22JBrowse
8095at6073Duplicated239.4138.0ENSDJXP00000006151.1mediator of RNA polymerase II transcription subunit 22JBrowse
8095at6073Duplicated239.4138.0ENSDJXP00000006155.1mediator of RNA polymerase II transcription subunit 22JBrowse
8095at6073Duplicated239.4138.0ENSDJXP00000006161.1mediator of RNA polymerase II transcription subunit 22JBrowse
8095at6073Duplicated239.2138.0ENSDJXP00000006159.1mediator of RNA polymerase II transcription subunit 22JBrowse
8257at6073Duplicated1482.9739.0ENSDJXP00000033059.1Cullin-3JBrowse
8257at6073Duplicated1417.8726.0ENSDJXP00000033045.1Cullin-3JBrowse
8257at6073Duplicated1262.4719.0ENSDJXP00000050802.1Cullin-3JBrowse
8280at6073Duplicated216.8185.0ENSDJXP00000050258.1uncharacterized protein LOC122947107JBrowse
8280at6073Duplicated206.4179.0ENSDJXP00000022409.1uncharacterized protein LOC122947107JBrowse
Go to page: of 314 pages
TOP