BUSCO Gene Details in Acropora gemmifera

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora gemmiferaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 78.8% [S: 65.8%, D: 13.0%] F: 12.3%, M: 8.9%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,524 (78.8%)2,109 (65.8%)415 (13.0%)395 (12.3%)284 (8.9%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora gemmifera: 3,444 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
16717at6073Duplicated618.6370.0agem_s0433.g7.t2major facilitator superfamily domain-containing protein 7-likeJBrowse
16788at6073Complete1074.9557.0agem_s0256.g18.t1protein SCAI-likeJBrowse
16884at6073Complete400.1246.0agem_s0014.g45.t1paired mesoderm homeobox protein 2JBrowse
16997at6073Complete164.6105.0agem_s0266.g30.t1HIG1 domain family member 2A, mitochondrialJBrowse
17010at6073Complete1118.0551.0agem_s0429.g6.t1dual specificity tyrosine-phosphorylation-regulated kinase 2JBrowse
17013at6073Complete482.3374.0agem_s0062.g44.t1mediator of RNA polymerase II transcription subunit 26JBrowse
17053at6073Complete1256.7654.0agem_s0088.g23.t1fermitin family homolog 2JBrowse
17075at6073Duplicated1200.4663.0agem_s0248.g22.t1conserved oligomeric Golgi complex subunit 7JBrowse
17075at6073Duplicated1186.0663.0agem_s0248.g22.t2conserved oligomeric Golgi complex subunit 7JBrowse
17079at6073Duplicated672.0324.0agem_s0082.g42.t1POU domain, class 4, transcription factor 3JBrowse
17079at6073Duplicated622.6290.0agem_s0082.g42.t2POU domain, class 4, transcription factor 3JBrowse
17115at6073Complete675.9411.0agem_s0065.g67.t1Transcriptional adapter 3JBrowse
17124at6073Complete883.6483.0agem_s0056.g23.t1integrator complex subunit 14JBrowse
17128at6073Complete498.4255.0agem_s0220.g17.t1malectinJBrowse
17141at6073Complete497.7315.0agem_s0060.g53.t1vegetative incompatibility protein HET-E-1-likeJBrowse
17159at6073Complete475.4279.0agem_s0026.g24.t1CBY1-interacting BAR domain-containing protein 1JBrowse
17166at6073Complete471.2236.0agem_s0202.g20.t1ras-related protein Rab-23JBrowse
17167at6073Complete200.9121.0agem_s0216.g35.t1uncharacterized protein C1orf189 homologJBrowse
17189at6073Fragmented345.0185.0agem_s0157.g20.t1mitochondrial import receptor subunit TOM70JBrowse
17225at6073Duplicated1373.2766.0agem_s0004.g98.t1Rho GTPase-activating protein 7JBrowse
Go to page: of 173 pages
TOP