BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
17260at6073Complete437.0272.0aint_s0069.g40.t11-acyl-sn-glycerol-3-phosphate acyltransferase alphaJBrowse
17332at6073Complete1067.8624.0aint_s0099.g35.t1metal transporter CNNM2JBrowse
17355at6073Complete360.3248.0aint_s0019.g69.t1uncharacterized protein LOC116292636JBrowse
17363at6073Fragmented696.9373.0aint_s0322.g16.t1transmembrane protein 180JBrowse
17399at6073Duplicated1847.61090.0aint_s0745.g3.t1bromodomain-containing protein 1JBrowse
17399at6073Duplicated1846.81090.0aint_s0745.g3.t2bromodomain-containing protein 1JBrowse
17431at6073Complete6475.34540.0aint_s0065.g9.t1Protocadherin Fat 4JBrowse
17432at6073Complete2338.61491.0aint_s0534.g3.t1NACHT and WD repeat domain-containing protein 2JBrowse
17438at6073Complete607.5354.0aint_s0243.g21.t1nucleoporin Nup43JBrowse
17443at6073Complete268.9135.0aint_s0226.g16.t1RING finger protein 11JBrowse
17446at6073Complete1156.6535.0aint_s0038.g18.t1DET1 homologJBrowse
17468at6073Complete892.6608.0aint_s0101.g70.t1SET and MYND domain-containing protein 4JBrowse
17485at6073Complete809.3514.0aint_s0071.g33.t1inactive ubiquitin carboxyl-terminal hydrolase 54-likeJBrowse
17523at6073Duplicated951.5542.0aint_s0332.g14.t2conserved oligomeric Golgi complex subunit 8JBrowse
17523at6073Duplicated889.1475.0aint_s0332.g14.t1conserved oligomeric Golgi complex subunit 8JBrowse
17529at6073Complete1137.4629.0aint_s0424.g17.t1RUN and FYVE domain-containing protein 1JBrowse
17543at6073Complete347.5208.0aint_s0356.g18.t1uncharacterized protein LOC114952910JBrowse
17564at6073Complete346.3223.0aint_s0094.g28.t1RPA-interacting protein AJBrowse
17567at6073Complete962.7510.0aint_s0157.g20.t1major facilitator superfamily domain-containing protein 6JBrowse
17590at6073Complete488.3339.0aint_s0054.g50.t1E3 ubiquitin-protein ligase RNF34JBrowse
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