BUSCO Gene Details in Acropora loripes

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora loripesBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.5% [S: 82.8%, D: 6.7%] F: 6.9%, M: 3.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,868 (89.5%)2,652 (82.8%)216 (6.7%)221 (6.9%)114 (3.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora loripes: 3,324 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
17260at6073Fragmented278.4168.0alor_g16032.t11-acyl-sn-glycerol-3-phosphate acyltransferase alphaJBrowse
17332at6073Complete1068.9623.0alor_g4879.t1metal transporter CNNM2JBrowse
17355at6073Complete352.6232.0alor_g6493.t1uncharacterized protein LOC116292636JBrowse
17399at6073Complete1716.31047.0alor_g1123.t1bromodomain-containing protein 1JBrowse
17431at6073Complete6486.94540.0alor_g25229.t1Protocadherin Fat 4JBrowse
17432at6073Complete2189.51434.0alor_g7429.t1NACHT and WD repeat domain-containing protein 2JBrowse
17438at6073Duplicated610.7354.0alor_g9795.t1nucleoporin Nup43JBrowse
17438at6073Duplicated541.9321.0alor_g9795.t2nucleoporin Nup43JBrowse
17443at6073Complete268.1135.0alor_g21593.t1RING finger protein 11JBrowse
17446at6073Complete1156.6535.0alor_g25841.t1DET1 homologJBrowse
17468at6073Complete897.8608.0alor_g10070.t1SET and MYND domain-containing protein 4JBrowse
17485at6073Complete804.8514.0alor_g16782.t1inactive ubiquitin carboxyl-terminal hydrolase 54-likeJBrowse
17520at6073Complete871.5465.0alor_g2233.t1Coiled-coil domain-containing protein 77JBrowse
17523at6073Complete803.5486.0alor_g14213.t1conserved oligomeric Golgi complex subunit 8JBrowse
17529at6073Complete1138.9629.0alor_g503.t1RUN and FYVE domain-containing protein 1JBrowse
17543at6073Complete347.8208.0alor_g10648.t1uncharacterized protein LOC114952910JBrowse
17564at6073Complete344.9223.0alor_g10722.t1RPA-interacting protein AJBrowse
17567at6073Complete959.1510.0alor_g26468.t1major facilitator superfamily domain-containing protein 6JBrowse
17591at6073Complete1512.0856.0alor_g1654.t1RNA-binding protein 15JBrowse
17606at6073Complete1016.6445.0alor_g4422.t1NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domainJBrowse
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