BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
11157at6073Complete461.1398.0XP_074619753.1V-type proton ATPase subunit S1JBrowse
11171at6073Duplicated993.9553.0XP_074616145.1probable ATP-dependent RNA helicase DDX52JBrowse
11171at6073Duplicated993.9553.0XP_074616146.1probable ATP-dependent RNA helicase DDX52JBrowse
11194at6073Duplicated404.7273.0XP_074622918.1THUMP domain-containing protein 1JBrowse
11194at6073Duplicated404.5273.0XP_074622919.1THUMP domain-containing protein 1JBrowse
11215at6073Duplicated1454.0733.0XP_074614744.1delta-1-pyrroline-5-carboxylate synthase-likeJBrowse
11215at6073Duplicated1443.7733.0XP_074614743.1delta-1-pyrroline-5-carboxylate synthase-likeJBrowse
11215at6073Duplicated1249.4649.0XP_074614745.1delta-1-pyrroline-5-carboxylate synthase-likeJBrowse
11215at6073Duplicated1248.6647.0XP_074614749.1delta-1-pyrroline-5-carboxylate synthase-likeJBrowse
11215at6073Duplicated1248.6647.0XP_074614750.1delta-1-pyrroline-5-carboxylate synthase-likeJBrowse
11215at6073Duplicated1247.7646.0XP_074614751.1delta-1-pyrroline-5-carboxylate synthase-likeJBrowse
11215at6073Duplicated1247.9645.0XP_074614747.1delta-1-pyrroline-5-carboxylate synthase-likeJBrowse
11215at6073Duplicated1247.9645.0XP_074614748.1delta-1-pyrroline-5-carboxylate synthase-likeJBrowse
11215at6073Duplicated1247.5645.0XP_074614752.1delta-1-pyrroline-5-carboxylate synthase-likeJBrowse
11255at6073Complete361.7247.0XP_074620395.1histone-lysine N-methyltransferase SETMARJBrowse
11315at6073Complete170.176.0XP_074613184.1small nuclear ribonucleoprotein GJBrowse
11491at6073Complete241.0122.0XP_074617937.1microtubule-associated proteins 1A/1B light chain 3A-likeJBrowse
11560at6073Duplicated1441.7832.0XP_074617372.1serine/threonine-protein phosphatase 4 regulatory subunit 1JBrowse
11560at6073Duplicated1390.0762.0XP_074617373.1serine/threonine-protein phosphatase 4 regulatory subunit 1JBrowse
11581at6073Complete237.1142.0XP_074637474.1ribonuclease P/MRP protein subunit POP5JBrowse
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