BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
17591at6073Complete1513.4856.0aint_s0026.g27.t1RNA-binding protein 15JBrowse
17606at6073Complete1016.6445.0aint_s0258.g11.t1NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domainJBrowse
17619at6073Complete311.7178.0aint_s0206.g18.t1E3 ubiquitin-protein ligase znrf2-likeJBrowse
17629at6073Duplicated1361.0823.0aint_s0234.g13.t3glycerol-3-phosphate acyltransferase 1, mitochondrial-likeJBrowse
17629at6073Duplicated1351.4819.0aint_s0234.g13.t2glycerol-3-phosphate acyltransferase 1, mitochondrial-likeJBrowse
17637at6073Complete733.6475.0aint_s0068.g74.t1T-cell immunomodulatory protein-likeJBrowse
17759at6073Complete468.7291.0aint_s0009.g25.t1Elongation factor Ts, mitochondrialJBrowse
17790at6073Complete812.4509.0aint_s0045.g32.t1major facilitator superfamily domain-containing protein 6JBrowse
17863at6073Complete375.4207.0aint_s0087.g19.t1DNA replication complex GINS protein SLD5JBrowse
17866at6073Complete1823.2799.0aint_s0505.g2.t1transitional endoplasmic reticulum ATPaseJBrowse
17892at6073Complete962.6473.0aint_s0516.g12.t1serine/threonine-protein kinase N2-likeJBrowse
17922at6073Duplicated1308.4642.0aint_s0232.g33.t2E3 ubiquitin-protein ligase traf7JBrowse
17922at6073Duplicated1227.0642.0aint_s0232.g33.t1E3 ubiquitin-protein ligase traf7JBrowse
17927at6073Complete732.0374.0aint_s0745.g7.t1cAMP-dependent protein kinase type II regulatory subunit-likeJBrowse
17971at6073Complete280.6154.0aint_s0023.g89.t1Mitochondrial fission process protein 1JBrowse
17995at6073Complete1304.6789.0aint_s0261.g11.t1protein disulfide-isomerase A5-likeJBrowse
18049at6073Complete423.9233.0aint_s0493.g14.t1uncharacterized protein KIAA0513-likeJBrowse
18121at6073Complete284.5208.0aint_s0169.g62.t1zinc finger CCCH domain-containing protein 15JBrowse
18130at6073Complete682.7480.0aint_s0041.g19.t1tRNA-specific adenosine deaminase 1JBrowse
18146at6073Duplicated913.3528.0aint_s0355.g15.t1pumilio homolog 3JBrowse
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