BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
11582at6073Complete313.4172.0XP_074617128.1ER membrane protein complex subunit 4JBrowse
11624at6073Complete290.7166.0XP_074621153.1uncharacterized protein LOC116303231JBrowse
11629at6073Complete409.3208.0XP_074608468.140S ribosomal proteinJBrowse
11698at6073Duplicated585.3317.0XP_074619456.1WD repeat-containing protein 55JBrowse
11698at6073Duplicated566.2307.0XP_074619458.1WD repeat-containing protein 55JBrowse
11744at6073Complete303.7172.0XP_074608615.1protein ATP6V1FNB-likeJBrowse
11765at6073Duplicated531.7275.0XP_074623085.1ubiquitin-conjugating enzyme E2 Z-likeJBrowse
11765at6073Duplicated476.6238.0XP_074623086.1ubiquitin-conjugating enzyme E2 Z-likeJBrowse
11802at6073Complete966.8522.0XP_074629514.1mitochondrial-processing peptidase subunit alphaJBrowse
11834at6073Complete396.9210.0XP_074631169.1UPF0428 protein CXorf56JBrowse
11852at6073Complete217.3119.0XP_074627350.128S ribosomal protein S6, mitochondrial-likeJBrowse
11858at6073Duplicated821.5373.0XP_074616532.1Casein kinase II subunit alphaJBrowse
11858at6073Duplicated821.5373.0XP_074616534.1Casein kinase II subunit alphaJBrowse
11940at6073Complete578.8304.0XP_074609123.1solute carrier family 35 member E3-likeJBrowse
11943at6073Complete902.1545.0XP_074615370.1TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5LJBrowse
12015at6073Complete760.4464.0XP_074609050.1DNA-(apurinic or apyrimidinic site) endonuclease 2JBrowse
12054at6073Complete254.8148.0XP_074630735.1glutaredoxin-related 5, mitochondrialJBrowse
12093at6073Complete1328.6721.0XP_074634825.1tyrosine-protein kinase HTK16JBrowse
12106at6073Duplicated970.2492.0XP_074619174.1GATA-binding factor 2-likeJBrowse
12106at6073Duplicated969.9492.0XP_074619173.1GATA-binding factor 2-likeJBrowse
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