BUSCO Gene Details in Haliclystus octoradiatus

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Haliclystus octoradiatusBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.5% [S: 71.4%, D: 2.1%] F: 9.2%, M: 17.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,355 (73.5%)2,287 (71.4%)68 (2.1%)294 (9.2%)554 (17.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.

BUSCO hits recorded for Haliclystus octoradiatus: 2,721 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
21672at6073Complete484.2509BRAKERHOCP00005008847.1small conductance calcium-activated potassium channel protein 2JBrowse
21682at6073Complete453.6285BRAKERHOCP00005010753.1nicotinate-nucleotide pyrophosphorylaseJBrowse
21716at6073Complete500.6415BRAKERHOCP00005014386.1Saccharopine dehydrogenase, NADP binding domainJBrowse
21775at6073Complete343.0187BRAKERHOCP00005010706.160S ribosomal protein L18JBrowse
21792at6073Duplicated312.1323BRAKERHOCP00005009828.1transcription factor SOX-9JBrowse
21792at6073Duplicated311.6291BRAKERHOCP00005010912.1transcription factor SOX-9JBrowse
21806at6073Fragmented211.5195BRAKERHOCP00005011111.1protein HEXIM-likeJBrowse
21859at6073Complete836.5515BRAKERHOCP00005002459.1Bloom syndrome proteinJBrowse
21925at6073Complete172.8155BRAKERHOCP00005015377.1ATP synthase subunit d, mitochondrialJBrowse
21963at6073Complete288.5266BRAKERHOCP00005011226.139S ribosomal protein L45, mitochondrialJBrowse
21973at6073Complete510.9414BRAKERHOCP00005011325.1ribosome biogenesis protein wdr12JBrowse
22162at6073Complete194.5338BRAKERHOCP00005004699.1uncharacterized protein C2orf81 homologJBrowse
22181at6073Complete2074.21765BRAKERHOCP00005011811.1voltage-dependent T-type calcium channel subunit alpha-1H-likeJBrowse
22263at6073Complete497.8437BRAKERHOCP00005000730.1dynein axonemal assembly factor 3JBrowse
22276at6073Complete109.8107BRAKERHOCP00005011727.1Mediator of RNA polymerase II transcription subunit 11JBrowse
22300at6073Fragmented602.5538BRAKERHOCP00005010329.1signal transducer and activator of transcription 5BJBrowse
22336at6073Complete270.9567BRAKERHOCP00005010781.1centrosomal protein of 70 kDa-likeJBrowse
22352at6073Fragmented234.3155BRAKERHOCP00005015600.1Charged multivesicular body protein 2bJBrowse
22360at6073Complete2019.71387BRAKERHOCP00005019118.1Lysine-specific demethylase 5AJBrowse
22364at6073Complete163.4161BRAKERHOCP00005019032.1Claudin domain-containing protein 2JBrowse
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