BUSCO Gene Details in Acropora echinata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora echinataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 79.0% [S: 66.3%, D: 12.6%] F: 12.4%, M: 8.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,530 (79.0%)2,125 (66.3%)405 (12.6%)397 (12.4%)276 (8.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora echinata: 3,435 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
17523at6073Duplicated954.8542.0aech_s0079.g23.t1conserved oligomeric Golgi complex subunit 8JBrowse
17523at6073Duplicated893.1475.0aech_s0079.g23.t2conserved oligomeric Golgi complex subunit 8JBrowse
17529at6073Duplicated1139.1629.0aech_s0021.g67.t1RUN and FYVE domain-containing protein 1JBrowse
17529at6073Duplicated1083.6602.0aech_s0021.g67.t2RUN and FYVE domain-containing protein 1JBrowse
17543at6073Complete348.6208.0aech_s0002.g425.t1uncharacterized protein LOC114952910JBrowse
17564at6073Complete345.6223.0aech_s0046.g59.t1RPA-interacting protein AJBrowse
17567at6073Complete962.3510.0aech_s0060.g100.t1major facilitator superfamily domain-containing protein 6JBrowse
17590at6073Complete488.5339.0aech_s0011.g419.t1E3 ubiquitin-protein ligase RNF34JBrowse
17591at6073Complete1512.4856.0aech_s0122.g26.t1RNA-binding protein 15JBrowse
17606at6073Complete889.2385.0aech_s0165.g32.t1NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domainJBrowse
17619at6073Complete311.6178.0aech_s0004.g396.t1E3 ubiquitin-protein ligase znrf2-likeJBrowse
17629at6073Complete1113.6679.0aech_s0092.g43.t1glycerol-3-phosphate acyltransferase 1, mitochondrial-likeJBrowse
17637at6073Duplicated852.7551.0aech_s0004.g203.t2T-cell immunomodulatory protein-likeJBrowse
17637at6073Duplicated836.4551.0aech_s0004.g203.t1T-cell immunomodulatory protein-likeJBrowse
17790at6073Complete810.0509.0aech_s0089.g72.t1major facilitator superfamily domain-containing protein 6JBrowse
17863at6073Complete375.9207.0aech_s0009.g283.t1DNA replication complex GINS protein SLD5JBrowse
17866at6073Duplicated1494.8688.0aech_s0174.g27.t1transitional endoplasmic reticulum ATPaseJBrowse
17866at6073Duplicated1494.3688.0aech_s0174.g27.t2transitional endoplasmic reticulum ATPaseJBrowse
17892at6073Complete874.7473.0aech_s0045.g68.t1serine/threonine-protein kinase N2-likeJBrowse
17922at6073Duplicated1321.3642.0aech_s0131.g30.t2E3 ubiquitin-protein ligase traf7JBrowse
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