BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
18146at6073Duplicated913.3528.0aint_s0355.g15.t2pumilio homolog 3JBrowse
18237at6073Complete793.3426.0aint_s0016.g18.t1MAPK/MAK/MRK overlapping kinase-likeJBrowse
18254at6073Complete993.4611.0aint_s0015.g41.t1uncharacterized protein LOC116290784JBrowse
18264at6073Complete1080.4711.0aint_s0031.g48.t1OTU domain-containing protein 7BJBrowse
18292at6073Complete341.7269.0aint_s0365.g29.t1uncharacterized protein C7orf57-like isoform X1JBrowse
18355at6073Fragmented740.2357.0aint_s1299.g1.t1histidine--tRNA ligase, cytoplasmic-likeJBrowse
18391at6073Fragmented509.9310.0aint_s0105.g24.t1E3 ubiquitin-protein ligase AMFR-likeJBrowse
18402at6073Complete292.0177.0aint_s0328.g21.t1NADH dehydrogenase JBrowse
18432at6073Duplicated464.3226.0aint_s0146.g7.t2testis, prostate and placenta-expressed protein-likeJBrowse
18432at6073Duplicated400.5226.0aint_s0146.g7.t1testis, prostate and placenta-expressed protein-likeJBrowse
18458at6073Complete351.1216.0aint_s0308.g10.t1ribonuclease P protein subunit p29-likeJBrowse
18459at6073Fragmented165.288.0aint_s0174.g64.t1trafficking protein particle complex subunit 2JBrowse
18482at6073Complete317.3180.0aint_s0376.g11.t1prenylated Rab acceptor protein 1JBrowse
18536at6073Complete180.398.0aint_s0099.g98.t1methionine-R-sulfoxide reductase B1JBrowse
18586at6073Complete326.6157.0aint_s0038.g40.t1EF-hand calcium-binding domain-containing 2-likeJBrowse
18598at6073Complete638.2435.0aint_s0074.g25.t1GPI mannosyltransferase 2JBrowse
18600at6073Complete317.0201.0aint_s0025.g49.t1coiled-coil domain-containing protein 103JBrowse
18664at6073Duplicated2143.21446.0aint_s0149.g25.t2transmembrane protein 131JBrowse
18664at6073Duplicated2024.51446.0aint_s0149.g25.t1transmembrane protein 131JBrowse
18667at6073Fragmented192.587.0aint_s0001.g63.t1transcription initiation factor TFIID subunit 13JBrowse
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