BUSCO Gene Details in Acropora loripes

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora loripesBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.5% [S: 82.8%, D: 6.7%] F: 6.9%, M: 3.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,868 (89.5%)2,652 (82.8%)216 (6.7%)221 (6.9%)114 (3.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora loripes: 3,324 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
18146at6073Complete913.0528.0alor_g10316.t1pumilio homolog 3JBrowse
18237at6073Complete793.5426.0alor_g8055.t1MAPK/MAK/MRK overlapping kinase-likeJBrowse
18253at6073Complete421.6283.0alor_g1565.t1ribonuclease H1JBrowse
18254at6073Complete983.1611.0alor_g6187.t1uncharacterized protein LOC116290784JBrowse
18264at6073Complete1071.3711.0alor_g24796.t1OTU domain-containing protein 7BJBrowse
18292at6073Complete361.9269.0alor_g11446.t1uncharacterized protein C7orf57-like isoform X1JBrowse
18355at6073Duplicated979.0490.0alor_g13344.t1histidine--tRNA ligase, cytoplasmic-likeJBrowse
18355at6073Duplicated963.1490.0alor_g13344.t2histidine--tRNA ligase, cytoplasmic-likeJBrowse
18391at6073Complete889.5498.0alor_g1978.t1E3 ubiquitin-protein ligase AMFR-likeJBrowse
18402at6073Complete295.6177.0alor_g21334.t1NADH dehydrogenase JBrowse
18432at6073Complete389.6220.0alor_g19473.t2testis, prostate and placenta-expressed protein-likeJBrowse
18458at6073Complete349.8216.0alor_g6278.t1ribonuclease P protein subunit p29-likeJBrowse
18459at6073Complete273.0144.0alor_g11965.t1trafficking protein particle complex subunit 2JBrowse
18536at6073Complete179.798.0alor_g10573.t1methionine-R-sulfoxide reductase B1JBrowse
18586at6073Complete326.6157.0alor_g25816.t1EF-hand calcium-binding domain-containing 2-likeJBrowse
18600at6073Complete315.6201.0alor_g9748.t1coiled-coil domain-containing protein 103JBrowse
18664at6073Complete1683.81280.0alor_g25342.t1transmembrane protein 131JBrowse
18667at6073Complete240.2116.0alor_g23489.t1transcription initiation factor TFIID subunit 13JBrowse
18686at6073Complete550.4260.0alor_g19289.t1proteasome subunit beta type-7JBrowse
18704at6073Fragmented396.4233.0alor_g68.t1WD repeat-containing protein 38JBrowse
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