BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
12106at6073Duplicated966.1492.0XP_074619175.1GATA-binding factor 2-likeJBrowse
12106at6073Duplicated966.1492.0XP_074619176.1GATA-binding factor 2-likeJBrowse
12106at6073Duplicated966.1492.0XP_074619177.1GATA-binding factor 2-likeJBrowse
12106at6073Duplicated966.1492.0XP_074619178.1GATA-binding factor 2-likeJBrowse
12106at6073Duplicated966.1492.0XP_074619179.1GATA-binding factor 2-likeJBrowse
12106at6073Duplicated966.1492.0XP_074619181.1GATA-binding factor 2-likeJBrowse
12106at6073Duplicated966.1492.0XP_074619182.1GATA-binding factor 2-likeJBrowse
12121at6073Complete504.7372.0XP_074627875.1Ectonucleoside triphosphate diphosphohydrolase 5JBrowse
12142at6073Complete579.5281.0XP_074638595.1Golgi phosphoprotein 3-likeJBrowse
12150at6073Complete855.1504.0XP_074607715.1protein smoothened-likeJBrowse
12151at6073Duplicated1570.9958.0XP_074638168.1F-box/WD repeat-containing protein 10JBrowse
12151at6073Duplicated1570.8958.0XP_074638167.1F-box/WD repeat-containing protein 10JBrowse
12222at6073Complete731.5462.0XP_074627184.1MORN repeat-containing protein 1JBrowse
12286at6073Duplicated1428.81015.0XP_074622013.1integrinJBrowse
12286at6073Duplicated1427.11015.0XP_074622012.1integrinJBrowse
12343at6073Complete584.5366.0XP_074622429.1UPF0415 protein C7orf25JBrowse
12353at6073Complete1277.9737.0XP_074613546.1probable E3 ubiquitin-protein ligase HECTD2JBrowse
12355at6073Complete579.0345.0XP_074614372.1uncharacterized protein LOC131786110 isoform X1JBrowse
12360at6073Complete1117.0570.0XP_074619929.1Phosphoglucomutase-2JBrowse
12410at6073Duplicated935.8505.0XP_074618885.1N6-adenosine-methyltransferase catalytic subunit-likeJBrowse
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