BUSCO Gene Details in Acropora loripes

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora loripesBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.5% [S: 82.8%, D: 6.7%] F: 6.9%, M: 3.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,868 (89.5%)2,652 (82.8%)216 (6.7%)221 (6.9%)114 (3.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora loripes: 3,324 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
18707at6073Complete595.0400.0alor_g11986.t1spermatogenesis-associated protein 6-likeJBrowse
18742at6073Complete1054.7641.0alor_g24131.t1E3 ubiquitin-protein ligase CBL-B-B-likeJBrowse
18784at6073Complete1758.7846.0alor_g20099.t1major vault proteinJBrowse
18842at6073Complete780.6361.0alor_g9028.t1ubiquitin carboxyl-terminal hydrolase 46JBrowse
18892at6073Duplicated484.1306.0alor_g24689.t1RNA pseudouridylate synthase domain-containing protein 4JBrowse
18892at6073Duplicated430.8261.0alor_g24693.t1RNA pseudouridylate synthase domain-containing protein 4JBrowse
18919at6073Complete433.8231.0alor_g2647.t1nanos homolog 1JBrowse
18927at6073Complete949.4637.0alor_g26772.t1E3 ubiquitin-protein ligase RNF216JBrowse
18942at6073Duplicated289.3161.0alor_g17517.t1deoxyuridine 5'-triphosphate nucleotidohydrolaseJBrowse
18942at6073Duplicated289.3161.0alor_g18742.t1deoxyuridine 5'-triphosphate nucleotidohydrolaseJBrowse
18945at6073Fragmented572.9266.0alor_g24585.t1E3 ubiquitin-protein ligase RNFT1-likeJBrowse
19054at6073Complete824.9462.0alor_g27002.t1actin-related protein 10JBrowse
19098at6073Complete164.099.0alor_g1945.t1uncharacterized bolA-like protein C4B3.11cJBrowse
19102at6073Complete965.9538.0alor_g12188.t1CAP Gly-rich domainJBrowse
19190at6073Complete750.0750.0alor_g10481.t1death domain-associated protein 6JBrowse
19201at6073Complete1445.41015.0alor_g23897.t1GTPase-activating protein and VPS9 domain-containing protein 1JBrowse
19235at6073Complete399.6209.0alor_g12441.t160S ribosomal protein L13JBrowse
19275at6073Complete427.8289.0alor_g11635.t1Zinc finger, RING-typeJBrowse
19298at6073Complete345.8192.0alor_g24171.t1tumor necrosis factor alpha-induced protein 8-like proteinJBrowse
19350at6073Complete798.7257.0alor_g6775.t1uncharacterized protein LOC116300237JBrowse
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