Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.
Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.5% [S: 71.4%, D: 2.1%] F: 9.2%, M: 17.3%
| Complete (C = S + D) | Single-copy (S) | Duplicated (D) | Fragmented (F) | Missing (M) |
|---|---|---|---|---|
| 2,355 (73.5%) | 2,287 (71.4%) | 68 (2.1%) | 294 (9.2%) | 554 (17.3%) |
A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.
Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.
| Busco ID | Status | Score | Length | Gene ID | Description | Visualization |
|---|---|---|---|---|---|---|
| 23215at6073 | Complete | 665.7 | 387 | BRAKERHOCP00005015877.1 | Acetyl-CoA acetyltransferase A, mitochondrial | JBrowse |
| 23245at6073 | Complete | 845.2 | 576 | BRAKERHOCP00005003383.1 | uncharacterized protein LOC111340008 | JBrowse |
| 23272at6073 | Complete | 559.7 | 429 | BRAKERHOCP00005017874.1 | potassium voltage-gated channel subfamily C member 1-like | JBrowse |
| 23276at6073 | Complete | 520.9 | 336 | BRAKERHOCP00005013917.1 | endophilin-B1-like | JBrowse |
| 23308at6073 | Complete | 218.7 | 175 | BRAKERHOCP00005018743.1 | phosphomevalonate kinase | JBrowse |
| 23362at6073 | Complete | 230.5 | 161 | BRAKERHOCP00005015057.1 | cytochrome b-245 light chain | JBrowse |
| 23434at6073 | Complete | 128.5 | 232 | BRAKERHOCP00005015423.1 | endosome-associated-trafficking regulator 1 | JBrowse |
| 23466at6073 | Fragmented | 424.6 | 348 | BRAKERHOCP00005011638.1 | cytochrome b-c1 complex subunit 2, mitochondrial | JBrowse |
| 23491at6073 | Complete | 432.1 | 377 | BRAKERHOCP00005003416.1 | armadillo-like helical domain containing protein 1 | JBrowse |
| 23497at6073 | Complete | 394.0 | 324 | BRAKERHOCP00005008037.1 | exosome complex component RRP45 | JBrowse |
| 23534at6073 | Fragmented | 667.8 | 466 | BRAKERHOCP00005002393.1 | leucine-rich repeat-containing protein 49 | JBrowse |
| 23599at6073 | Complete | 901.9 | 598 | BRAKERHOCP00005004720.1 | Polyadenylate-binding protein 4 | JBrowse |
| 23600at6073 | Complete | 739.2 | 477 | BRAKERHOCP00005014556.1 | protein GDAP2 homolog | JBrowse |
| 23689at6073 | Complete | 365.1 | 191 | BRAKERHOCP00005015169.1 | charged multivesicular body protein 1b | JBrowse |
| 23809at6073 | Complete | 1603.7 | 1108 | BRAKERHOCP00005011978.1 | probable ATP-dependent RNA helicase DHX37 | JBrowse |
| 23852at6073 | Fragmented | 634.4 | 370 | BRAKERHOCP00005019925.1 | coatomer subunit delta | JBrowse |
| 23930at6073 | Complete | 319.1 | 285 | BRAKERHOCP00005019033.1 | histone-lysine N-methyltransferase SUV39H2 | JBrowse |
| 23956at6073 | Fragmented | 319.2 | 211 | BRAKERHOCP00005007474.1 | protein-serine O-palmitoleoyltransferase porcupine-like | JBrowse |
| 23958at6073 | Complete | 845.9 | 775 | BRAKERHOCP00005013846.1 | Kinase suppressor of Ras 1 | JBrowse |
| 23992at6073 | Complete | 483.6 | 388 | BRAKERHOCP00005006158.1 | CTD small phosphatase-like protein 2 | JBrowse |