BUSCO Gene Details

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
1408at6073Duplicated264.9173.0aint_s0077.g84.t2dnaJ homolog subfamily C member 12-likeJBrowse
1408at6073Duplicated261.1173.0aint_s0077.g84.t1dnaJ homolog subfamily C member 12-likeJBrowse
1411at6073Complete610.3351.0aint_s0055.g115.t11-acyl-sn-glycerol-3-phosphate acyltransferase epsilonJBrowse
1419at6073Complete736.6350.0aint_s0002.g51.t1protein arginine N-methyltransferase 1JBrowse
1422at6073Complete1285.1608.0aint_s0037.g7.t1Integrator complex subunit 11JBrowse
1440at6073Complete424.6236.0aint_s0090.g40.t1cyanocobalamin reductase / alkylcobalamin dealkylaseJBrowse
1457at6073Complete946.8402.0aint_s0225.g27.t1ceramide glucosyltransferaseJBrowse
1484at6073Complete458.6216.0aint_s0047.g77.t1cleavage and polyadenylation specificity factor subunit 5JBrowse
1491at6073Fragmented405.7223.0aint_s0458.g3.t1cell cycle control protein 50A-likeJBrowse
1580at6073Complete674.2347.0aint_s0121.g5.t1dual specificity mitogen-activated protein kinase kinase 4JBrowse
1599at6073Complete653.6319.0aint_s0413.g22.t1WD repeat domain phosphoinositide-interacting protein 4JBrowse
1619at6073Complete185.192.0aint_s0382.g33.t1transcription elongation factor SPT4JBrowse
1622at6073Complete814.1418.0aint_s0040.g23.t1mannose-1-phosphate guanyltransferase alphaJBrowse
1627at6073Complete476.4273.0aint_s0325.g21.t1tubulin polyglutamylase complex subunit 2JBrowse
1630at6073Complete665.7393.0aint_s0517.g10.t1DNA excision repair protein ERCC-8JBrowse
1660at6073Complete302.8200.0aint_s0196.g5.t1ubiquitin-like-conjugating enzyme ATG10JBrowse
1672at6073Complete1765.9850.0aint_s0819.g9.t1DNA topoisomerase 3-beta-1JBrowse
1705at6073Fragmented113.979.0aint_s0011.g53.t1Selenoprotein F/MJBrowse
1748at6073Complete557.4259.0aint_s0035.g10.t1Succinate dehydrogenase JBrowse
1757at6073Complete1002.4530.0aint_s0337.g7.t1frizzled-1-likeJBrowse
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