BUSCO Gene Details in Acropora loripes

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora loripesBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.5% [S: 82.8%, D: 6.7%] F: 6.9%, M: 3.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,868 (89.5%)2,652 (82.8%)216 (6.7%)221 (6.9%)114 (3.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora loripes: 3,324 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
1408at6073Complete263.3173.0alor_g7178.t1dnaJ homolog subfamily C member 12-likeJBrowse
1411at6073Complete505.7296.0alor_g24676.t11-acyl-sn-glycerol-3-phosphate acyltransferase epsilonJBrowse
1419at6073Duplicated703.8350.0alor_g23762.t1protein arginine N-methyltransferase 1JBrowse
1419at6073Duplicated674.9324.0alor_g22069.t1protein arginine N-methyltransferase 1JBrowse
1422at6073Fragmented518.3290.0alor_g17873.t1Integrator complex subunit 11JBrowse
1440at6073Duplicated417.5237.0alor_g16948.t1cyanocobalamin reductase / alkylcobalamin dealkylaseJBrowse
1440at6073Duplicated412.7237.0alor_g16949.t1cyanocobalamin reductase / alkylcobalamin dealkylaseJBrowse
1457at6073Complete667.9352.0alor_g10227.t1ceramide glucosyltransferaseJBrowse
1484at6073Complete441.1196.0alor_g1789.t1cleavage and polyadenylation specificity factor subunit 5JBrowse
1491at6073Duplicated597.0329.0alor_g18532.t1cell cycle control protein 50A-likeJBrowse
1491at6073Duplicated596.9329.0alor_g18532.t2cell cycle control protein 50A-likeJBrowse
1580at6073Complete672.5347.0alor_g2674.t1dual specificity mitogen-activated protein kinase kinase 4JBrowse
1599at6073Complete689.0338.0alor_g14558.t1WD repeat domain phosphoinositide-interacting protein 4JBrowse
1619at6073Fragmented185.488.0alor_g15050.t1transcription elongation factor SPT4JBrowse
1622at6073Complete814.1418.0alor_g23206.t1mannose-1-phosphate guanyltransferase alphaJBrowse
1627at6073Complete478.0274.0alor_g23788.t1tubulin polyglutamylase complex subunit 2JBrowse
1630at6073Complete666.0393.0alor_g16243.t1DNA excision repair protein ERCC-8JBrowse
1660at6073Complete303.6200.0alor_g12161.t1ubiquitin-like-conjugating enzyme ATG10JBrowse
1672at6073Complete1764.5850.0alor_g19310.t1DNA topoisomerase 3-beta-1JBrowse
1705at6073Fragmented115.169.0alor_g10514.t1Selenoprotein F/MJBrowse
Go to page: of 167 pages
TOP