BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
1118at6073Complete481.9285.0XP_074632755.1embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein-likeJBrowse
1121at6073Complete926.2448.0XP_074620668.1Integrin-linked kinaseJBrowse
1137at6073Complete519.7302.0XP_074629708.1Dual specificity protein phosphatase 10JBrowse
1154at6073Complete250.9146.0XP_074614217.1Transmembrane protein 72JBrowse
1182at6073Duplicated966.4450.0XP_074638073.1Serine/threonine-protein kinase 38JBrowse
1182at6073Duplicated962.8450.0XP_074638072.1Serine/threonine-protein kinase 38JBrowse
1204at6073Complete281.9141.0XP_074632924.1trafficking protein particle complex subunit 1JBrowse
1219at6073Duplicated787.7361.0XP_074627994.1COUP transcription factor 2-likeJBrowse
1219at6073Duplicated787.6361.0XP_074627939.1COUP transcription factor 2-likeJBrowse
1219at6073Duplicated787.6361.0XP_074627958.1COUP transcription factor 2-likeJBrowse
1219at6073Duplicated780.7361.0XP_074627966.1COUP transcription factor 2-likeJBrowse
1219at6073Duplicated780.7361.0XP_074627974.1COUP transcription factor 2-likeJBrowse
1219at6073Duplicated780.7361.0XP_074627980.1COUP transcription factor 2-likeJBrowse
1219at6073Duplicated780.7361.0XP_074627987.1COUP transcription factor 2-likeJBrowse
1219at6073Duplicated780.6361.0XP_074627931.1COUP transcription factor 2-likeJBrowse
1219at6073Duplicated780.6361.0XP_074627948.1COUP transcription factor 2-likeJBrowse
1219at6073Duplicated780.5361.0XP_074627924.1COUP transcription factor 2-likeJBrowse
1240at6073Duplicated596.8466.0XP_074622804.1uncharacterized protein LOC110041196 isoform X1JBrowse
1240at6073Duplicated596.8466.0XP_074622805.1uncharacterized protein LOC110041196 isoform X1JBrowse
1240at6073Duplicated596.8466.0XP_074622807.1uncharacterized protein LOC110041196 isoform X1JBrowse
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