BUSCO Gene Details in Haliclystus octoradiatus

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Haliclystus octoradiatusBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.5% [S: 71.4%, D: 2.1%] F: 9.2%, M: 17.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,355 (73.5%)2,287 (71.4%)68 (2.1%)294 (9.2%)554 (17.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.

BUSCO hits recorded for Haliclystus octoradiatus: 5,222 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
935at6073Duplicated262.1152.0g14548.t1.1ORM1-like protein 1JBrowse
970at6073Duplicated964.5575.0BRAKERHOCP00005020914.1alkyldihydroxyacetonephosphate synthase, peroxisomal-likeJBrowse
970at6073Duplicated964.5575.0g7828.t1.1alkyldihydroxyacetonephosphate synthase, peroxisomal-likeJBrowse
980at6073Duplicated195.4112.0BRAKERHOCP00005012944.1mediator of RNA polymerase II transcription subunit 31JBrowse
980at6073Duplicated195.4112.0g19303.t1.1mediator of RNA polymerase II transcription subunit 31JBrowse
1001at6073Duplicated485.8305.0BRAKERHOCP00005014877.1pirin-like proteinJBrowse
1001at6073Duplicated485.8305.0g16269.t1.1pirin-like proteinJBrowse
1029at6073Duplicated857.7660.0BRAKERHOCP00005004252.1polyunsaturated fatty acid 5-lipoxygenase-likeJBrowse
1029at6073Duplicated857.7660.0g12860.t1.1polyunsaturated fatty acid 5-lipoxygenase-likeJBrowse
1029at6073Duplicated836.4651.0BRAKERHOCP00005011199.1polyunsaturated fatty acid 5-lipoxygenase-likeJBrowse
1029at6073Duplicated836.4651.0g13990.t1.1polyunsaturated fatty acid 5-lipoxygenase-likeJBrowse
1030at6073Duplicated649.5422.0BRAKERHOCP00005002297.1lysine-specific demethylase 8-likeJBrowse
1030at6073Duplicated649.5422.0g4580.t1.1lysine-specific demethylase 8-likeJBrowse
1053at6073Duplicated532.1287.0BRAKERHOCP00005017894.1Endoplasmic reticulum-Golgi intermediate compartment protein 1JBrowse
1053at6073Duplicated532.1287.0g1368.t1.1Endoplasmic reticulum-Golgi intermediate compartment protein 1JBrowse
1121at6073Duplicated784.4446.0BRAKERHOCP00005008861.1Integrin-linked kinaseJBrowse
1121at6073Duplicated784.4446.0g2432.t1.1Integrin-linked kinaseJBrowse
1137at6073Duplicated374.5296.0BRAKERHOCP00005001881.1Dual specificity protein phosphatase 10JBrowse
1137at6073Duplicated374.5296.0g6406.t1.1Dual specificity protein phosphatase 10JBrowse
1137at6073Duplicated374.1293.07724_t.1Dual specificity protein phosphatase 10JBrowse
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