BUSCO Gene Details in Orbicella faveolata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Orbicella faveolataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.6% [S: 72.7%, D: 16.8%] F: 8.5%, M: 1.9%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,869 (89.6%)2,330 (72.7%)539 (16.8%)273 (8.5%)61 (1.9%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Orbicella faveolata: 3,961 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
1204at6073Complete282.4141.0XP_020624397.1trafficking protein particle complex subunit 1JBrowse
1219at6073Duplicated784.7360.0XP_020604426.1COUP transcription factor 2-likeJBrowse
1219at6073Duplicated784.3360.0XP_020604423.1COUP transcription factor 2-likeJBrowse
1219at6073Duplicated777.7360.0XP_020604424.1COUP transcription factor 2-likeJBrowse
1219at6073Duplicated777.7360.0XP_020604425.1COUP transcription factor 2-likeJBrowse
1219at6073Duplicated777.3360.0XP_020604422.1COUP transcription factor 2-likeJBrowse
1240at6073Duplicated620.1467.0XP_020602145.1uncharacterized protein LOC110041196 isoform X1JBrowse
1240at6073Duplicated620.1467.0XP_020602152.1uncharacterized protein LOC110041196 isoform X1JBrowse
1240at6073Duplicated620.1467.0XP_020602157.1uncharacterized protein LOC110041196 isoform X1JBrowse
1240at6073Duplicated620.1467.0XP_020602163.1uncharacterized protein LOC110041196 isoform X1JBrowse
1240at6073Duplicated619.9467.0XP_020602140.1uncharacterized protein LOC110041196 isoform X1JBrowse
1244at6073Complete654.9343.0XP_020631261.1DENN domain-containing protein 11-likeJBrowse
1254at6073Complete270.0160.0XP_020614698.1succinate dehydrogenase JBrowse
1267at6073Complete860.4411.0XP_020623432.1histone acetyltransferase KAT8-likeJBrowse
1341at6073Complete496.1216.0XP_020603620.1Ras-related protein Rab-14JBrowse
1342at6073Duplicated378.4192.0XP_020619498.1protein N-terminal glutamine amidohydrolaseJBrowse
1342at6073Duplicated377.2192.0XP_020619497.1protein N-terminal glutamine amidohydrolaseJBrowse
1358at6073Complete909.4393.0XP_020618183.1actin-related protein 2JBrowse
1360at6073Complete233.6134.0XP_020601233.1NTF2-related export protein 1JBrowse
1361at6073Complete575.9316.0XP_020617444.1potassium channel subfamily K member 9JBrowse
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