BUSCO Gene Details

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Ricordea floridaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.5% [S: 48.6%, D: 31.9%] F: 9.0%, M: 10.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,578 (80.5%)1,556 (48.6%)1,022 (31.9%)288 (9.0%)337 (10.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Ricordea florida: 4,305 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
916at6073Duplicated837.6484.0ENSORFP00005001286.1Alpha-(1,3)-fucosyltransferase 11JBrowse
916at6073Duplicated818.5436.0ENSORFP00005037993.1Alpha-(1,3)-fucosyltransferase 11JBrowse
916at6073Duplicated817.7436.0ENSORFP00005001297.1Alpha-(1,3)-fucosyltransferase 11JBrowse
916at6073Duplicated816.3432.0ENSORFP00005037988.1Alpha-(1,3)-fucosyltransferase 11JBrowse
932at6073Duplicated471.3241.0ENSORFP00005011054.1tRNA (guanine-N(7)-)-methyltransferaseJBrowse
932at6073Duplicated471.3241.0ENSORFP00005011062.1tRNA (guanine-N(7)-)-methyltransferaseJBrowse
935at6073Complete293.3153.0ENSORFP00005038739.1ORM1-like protein 1JBrowse
970at6073Complete1160.2576.0ENSORFP00005009453.1alkyldihydroxyacetonephosphate synthase, peroxisomal-likeJBrowse
980at6073Duplicated232.7111.0ENSORFP00005036522.1mediator of RNA polymerase II transcription subunit 31JBrowse
980at6073Duplicated229.8110.0ENSORFP00005036510.1mediator of RNA polymerase II transcription subunit 31JBrowse
1001at6073Complete603.1308.0ENSORFP00005009689.1pirin-like proteinJBrowse
1029at6073Duplicated856.9652.0ENSORFP00005036511.1polyunsaturated fatty acid 5-lipoxygenase-likeJBrowse
1029at6073Duplicated857.1651.0ENSORFP00005036499.1polyunsaturated fatty acid 5-lipoxygenase-likeJBrowse
1053at6073Complete584.7286.0ENSORFP00005025317.1Endoplasmic reticulum-Golgi intermediate compartment protein 1JBrowse
1118at6073Complete455.0294.0ENSORFP00005030092.1embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein-likeJBrowse
1137at6073Complete522.4303.0ENSORFP00005015235.1Dual specificity protein phosphatase 10JBrowse
1154at6073Duplicated233.8146.0ENSORFP00005033373.1Transmembrane protein 72JBrowse
1154at6073Duplicated233.8146.0ENSORFP00005035707.1Transmembrane protein 72JBrowse
1154at6073Duplicated233.8146.0ENSORFP00005049254.1Transmembrane protein 72JBrowse
1204at6073Duplicated281.7141.0ENSORFP00005016449.1trafficking protein particle complex subunit 1JBrowse
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