BUSCO Gene Details in Turritopsis rubra

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Turritopsis rubraBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 77.6% [S: 74.9%, D: 2.7%] F: 11.7%, M: 10.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,487 (77.6%)2,400 (74.9%)87 (2.7%)376 (11.7%)340 (10.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.

BUSCO hits recorded for Turritopsis rubra: 5,658 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
810at6073Duplicated602.0501.0g17798.t1.1membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinaseJBrowse
837at6073Duplicated357.6178.0BRAKERIOWP00000005473.1ADP-ribosylation factor-like protein 5BJBrowse
837at6073Duplicated357.6178.0g20349.t1.1ADP-ribosylation factor-like protein 5BJBrowse
916at6073Duplicated494.0434.0BRAKERIOWP00000000475.1Alpha-(1,3)-fucosyltransferase 11JBrowse
916at6073Duplicated494.0434.0g17928.t1.1Alpha-(1,3)-fucosyltransferase 11JBrowse
932at6073Duplicated431.2239.0BRAKERIOWP00000015653.1tRNA (guanine-N(7)-)-methyltransferaseJBrowse
932at6073Duplicated431.2239.0g19710.t1.1tRNA (guanine-N(7)-)-methyltransferaseJBrowse
935at6073Duplicated272.8152.0BRAKERIOWP00000003618.1ORM1-like protein 1JBrowse
935at6073Duplicated272.8152.0g5085.t1.1ORM1-like protein 1JBrowse
970at6073Duplicated979.2495.0BRAKERIOWP00000006168.1alkyldihydroxyacetonephosphate synthase, peroxisomal-likeJBrowse
970at6073Duplicated979.2495.0g9261.t1.1alkyldihydroxyacetonephosphate synthase, peroxisomal-likeJBrowse
980at6073Duplicated209.7107.0BRAKERIOWP00000011621.1mediator of RNA polymerase II transcription subunit 31JBrowse
980at6073Duplicated209.7107.0g15871.t1.1mediator of RNA polymerase II transcription subunit 31JBrowse
1001at6073Duplicated488.6287.0BRAKERIOWP00000012236.1pirin-like proteinJBrowse
1001at6073Duplicated488.6287.0g3290.t1.1pirin-like proteinJBrowse
1029at6073Duplicated944.2664.0BRAKERIOWP00000000826.1polyunsaturated fatty acid 5-lipoxygenase-likeJBrowse
1029at6073Duplicated944.2664.0g19056.t1.1polyunsaturated fatty acid 5-lipoxygenase-likeJBrowse
1053at6073Duplicated484.7287.0BRAKERIOWP00000008964.1Endoplasmic reticulum-Golgi intermediate compartment protein 1JBrowse
1053at6073Duplicated484.7287.0g425.t1.1Endoplasmic reticulum-Golgi intermediate compartment protein 1JBrowse
1118at6073Duplicated401.0286.0BRAKERIOWP00000005685.1embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein-likeJBrowse
Go to page: of 283 pages
TOP